STRINGSTRING
AGY53059.1 AGY53059.1 thrA thrA AGY53006.1 AGY53006.1 sglT sglT nadC nadC yfgC yfgC AGY52970.1 AGY52970.1 AGY52928.1 AGY52928.1 yqgF yqgF engD engD pepP pepP AGY54936.1 AGY54936.1 folK folK AGY54885.1 AGY54885.1 AGY54884.1 AGY54884.1 AGY54866.1 AGY54866.1 AGY54861.1 AGY54861.1 rpsB rpsB AGY54836.1 AGY54836.1 AGY54831.1 AGY54831.1 sufC sufC sufD sufD ispE ispE bcp bcp tadA tadA AGY54805.1 AGY54805.1 yfbG yfbG AGY54755.1 AGY54755.1 rpsL rpsL AGY54676.1 AGY54676.1 AGY54666.1 AGY54666.1 AGY54636.1 AGY54636.1 ybeY ybeY AGY54621.1 AGY54621.1 dck dck AGY54557.1 AGY54557.1 yhhW yhhW pdhB pdhB pdhA pdhA betC betC AGY54508.1 AGY54508.1 AGY54482.1 AGY54482.1 bioB bioB AGY54460.1 AGY54460.1 yhaA yhaA rplP rplP rpsM rpsM rpsD rpsD AGY54352.1 AGY54352.1 nuoE nuoE AGY54335.1 AGY54335.1 AGY54305.1 AGY54305.1 AGY52793.1 AGY52793.1 AGY54245.1 AGY54245.1 AGY54236.1 AGY54236.1 AGY54229.1 AGY54229.1 rplA rplA AGY52776.1 AGY52776.1 AGY54112.1 AGY54112.1 ubiX ubiX AGY54068.1 AGY54068.1 ybgG ybgG cat2 cat2 nuoE2 nuoE2 queD queD AGY53964.1 AGY53964.1 purD purD yugH yugH rnz rnz cdd cdd yfcH yfcH lipB lipB AGY53850.1 AGY53850.1 AGY53842.1 AGY53842.1 atpC atpC nahA nahA pssA pssA ywaD ywaD pepC pepC AGY53792.1 AGY53792.1 AGY53789.1 AGY53789.1 AGY53782.1 AGY53782.1 vdlC vdlC AGY53773.1 AGY53773.1 AGY53770.1 AGY53770.1 hflB hflB AGY53733.1 AGY53733.1 crt crt leuA leuA AGY53705.1 AGY53705.1 AGY53702.1 AGY53702.1 yidJ yidJ rarA rarA speA speA AGY53640.1 AGY53640.1 AGY53639.1 AGY53639.1 yycJ yycJ cpdB cpdB AGY53582.1 AGY53582.1 rbpD rbpD ylbK ylbK nfo nfo ptpA ptpA pyk pyk nadD nadD iap iap AGY53387.1 AGY53387.1 AGY53379.1 AGY53379.1 tktA tktA rprY rprY lpxA lpxA AGY53356.1 AGY53356.1 AGY53332.1 AGY53332.1 AGY53324.1 AGY53324.1 truA truA purF purF AGY53315.1 AGY53315.1 pheA pheA ilvE ilvE ilvC ilvC ilvD ilvD AGY53264.1 AGY53264.1 AGY53258.1 AGY53258.1 guaD guaD AGY53214.1 AGY53214.1 ribC ribC adk adk AGY53166.1 AGY53166.1 fadD15 fadD15 AGY53099.1 AGY53099.1 AGY53096.1 AGY53096.1 serC serC rbpE rbpE AGY53077.1 AGY53077.1 etfA etfA bcd bcd argB argB argC argC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGY53059.1Acetyltransferase Family Protein. (182 aa)
thrABifunctional aspartokinase/homoserine dehydrogenase. (814 aa)
AGY53006.1Metallophosphoesterase. (1078 aa)
sglTSodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (614 aa)
nadCPutative nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. (287 aa)
yfgCTPR repeat-containing protein. (270 aa)
AGY52970.1Hypothetical protein. (184 aa)
AGY52928.1Hypothetical protein. (387 aa)
yqgFPutative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (138 aa)
engDGTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (367 aa)
pepPXaa-Pro aminopeptidase; Belongs to the peptidase M24B family. (463 aa)
AGY54936.1Putative long-chain-fatty-acid--CoA ligase. (589 aa)
folK2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. (163 aa)
AGY54885.1Phosphatidate Cytidylyltransferase. (224 aa)
AGY54884.1Male Sterility Domain-Containing Protein. (368 aa)
AGY54866.1FAD Dependent Oxidoreductase. (117 aa)
AGY54861.1TPR Repeat-Containing Protein. (843 aa)
rpsB30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (287 aa)
AGY54836.1G:T/U mismatch-specific uracil/thymine DNA-glycosylase. (144 aa)
AGY54831.1Hypothetical protein. (477 aa)
sufCPutative ATP-dependent transporter. (247 aa)
sufDFeS cluster assembly protein sufD. (346 aa)
ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (259 aa)
bcpPutative peroxiredoxin bcp. (142 aa)
tadAtRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (137 aa)
AGY54805.1Hypothetical protein. (565 aa)
yfbGPutative UDP-glucose 4-epimerase. (312 aa)
AGY54755.1Phosphate regulon transcriptional regulatory protein phoB. (116 aa)
rpsL30S ribosomal protein S12. (61 aa)
AGY54676.1SEFIR Domain-Containing Protein. (399 aa)
AGY54666.1O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase. (413 aa)
AGY54636.1Hypothetical protein. (396 aa)
ybeYPutative rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (146 aa)
AGY54621.1ADP-Ribosylglycohydrolase Family Protein. (478 aa)
dckDeoxyadenosine/deoxycytidine kinase. (205 aa)
AGY54557.1Hypothetical protein. (118 aa)
yhhWPirin-like protein; Belongs to the pirin family. (292 aa)
pdhBPyruvate dehydrogenase E1 component subunit beta. (325 aa)
pdhAPyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (367 aa)
betCCholine-sulfatase. (507 aa)
AGY54508.1Integral Membrane Protein. (288 aa)
AGY54482.1Beta-hexosaminidase. (545 aa)
bioBBiotin synthase. (362 aa)
AGY54460.1Hypothetical protein. (78 aa)
yhaAPutative amidohydrolase yhaA. (386 aa)
rplP50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (123 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (125 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (201 aa)
AGY54352.1Hypothetical protein. (56 aa)
nuoENADH-quinone oxidoreductase subunit E. (178 aa)
AGY54335.1Cupin 2 Barrel Domain-Containing Protein. (152 aa)
AGY54305.1DEAD-DEAH Box Helicase Domain-Containing Protein VrlS. (315 aa)
AGY52793.1Arginase/Agmatinase/Formiminoglutamase. (330 aa)
AGY54245.1Aminopeptidase YwaD. (435 aa)
AGY54236.1Bifunctional aspartokinase/homoserine dehydrogenase 1. (809 aa)
AGY54229.1Stage II Sporulation Protein E. (399 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (233 aa)
AGY52776.1Peptidase M. (522 aa)
AGY54112.1Putative UDP-glucose 4-epimerase. (334 aa)
ubiXPutative aromatic acid decarboxylase. (191 aa)
AGY54068.1Beta-hexosaminidase. (582 aa)
ybgGAlpha-Mannosidase. (1048 aa)
cat24-hydroxybutyrate coenzyme A transferase. (434 aa)
nuoE2NADH-quinone oxidoreductase subunit E 2. (158 aa)
queD6-carboxy-5,6,7,8-tetrahydropterin synthase. (151 aa)
AGY53964.1Peptidase M. (450 aa)
purDPhosphoribosylamine--glycine ligase; Belongs to the GARS family. (425 aa)
yugHPutative aminotransferase YugH. (400 aa)
rnzRibonuclease Z. (274 aa)
cddCytidine deaminase. (159 aa)
yfcHEpimerase family protein. (285 aa)
lipBOctanoyltransferase. (267 aa)
AGY53850.1Hypothetical protein. (236 aa)
AGY53842.1V-type ATP synthase subunit B. (439 aa)
atpCV-type ATP synthase subunit C. (211 aa)
nahABeta-hexosaminidase. (721 aa)
pssACDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (237 aa)
ywaDAminopeptidase YwaD. (523 aa)
pepCAminopeptidase C; Belongs to the peptidase C1 family. (371 aa)
AGY53792.1Cysteine Peptidase; Belongs to the peptidase C1 family. (397 aa)
AGY53789.1Putative long-chain-fatty-acid--CoA ligase. (540 aa)
AGY53782.1Hypothetical protein. (289 aa)
vdlCPutative short-chain type dehydrogenase/reductase vdlC; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)
AGY53773.1Co/Zn/Cd Cation Transporter-Like Protein. (136 aa)
AGY53770.1Cation Efflux Protein. (53 aa)
hflBPutative AAA family ATPase y4kL. (364 aa)
AGY53733.1Amidophosphoribosyltransferase. (628 aa)
crt3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (498 aa)
AGY53705.1Long-chain-fatty-acid--CoA ligase FadD15. (619 aa)
AGY53702.13-aminobutyrl-CoA ammonia lyase. (128 aa)
yidJArylsulfatase. (496 aa)
rarAReplication-associated recombination protein A. (416 aa)
speABiosynthetic arginine decarboxylase. (463 aa)
AGY53640.1Electron transfer flavoprotein, alpha subunit. (339 aa)
AGY53639.1Acyl-CoA dehydrogenase. (575 aa)
yycJPutative metallo-hydrolase yycJ. (266 aa)
cpdB2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; Belongs to the 5'-nucleotidase family. (577 aa)
AGY53582.1Fumarylacetoacetate Hydrolase Family Protein. (183 aa)
rbpDPutative RNA-binding protein rbpD. (87 aa)
ylbKPutative NTE family protein ylbK. (256 aa)
nfoPutative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (282 aa)
ptpAProlyl tripeptidyl peptidase. (676 aa)
pykPyruvate kinase; Belongs to the pyruvate kinase family. (472 aa)
nadDPutative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (186 aa)
iapPeptidase M. (316 aa)
AGY53387.1Glutamine Cyclotransferase. (266 aa)
AGY53379.1Glutamate synthase [NADPH] large chain. (474 aa)
tktAPutative transketolase N-terminal section. (261 aa)
rprYTranscriptional regulatory protein rprY. (223 aa)
lpxAAcyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (263 aa)
AGY53356.1Deoxyguanosinetriphosphate triphosphohydrolase. (391 aa)
AGY53332.1Aminopeptidase S. (523 aa)
AGY53324.1Hypothetical protein. (330 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (276 aa)
purFPutative amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (469 aa)
AGY53315.1Hypothetical protein. (476 aa)
pheAP-protein. (285 aa)
ilvEBranched-chain-amino-acid aminotransferase. (335 aa)
ilvCKetol-acid reductoisomerase. (346 aa)
ilvDDihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (608 aa)
AGY53264.1Hypothetical protein. (138 aa)
AGY53258.1Putative UDP-glucuronic acid epimerase. (335 aa)
guaDGuanine deaminase. (156 aa)
AGY53214.1Hypothetical protein. (131 aa)
ribCRiboflavin biosynthesis protein ribC; Belongs to the ribF family. (304 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (192 aa)
AGY53166.1Trifunctional nucleotide phosphoesterase protein YfkN. (276 aa)
fadD15Long-chain-fatty-acid--CoA ligase FadD15. (553 aa)
AGY53099.1Agmatinase; Belongs to the arginase family. (343 aa)
AGY53096.1Hypothetical protein. (120 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (357 aa)
rbpEPutative RNA-binding protein rbpE. (109 aa)
AGY53077.1Hypothetical protein. (291 aa)
etfAElectron transfer flavoprotein subunit alpha. (331 aa)
bcdAcyl-CoA dehydrogenase, short-chain specific. (379 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (258 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (330 aa)
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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