STRINGSTRING
dppF dppF glnQ-4 glnQ-4 cca cca SHF49884.1 SHF49884.1 hslO hslO SHF49939.1 SHF49939.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dppFATP-binding cassette, subfamily B. (610 aa)
glnQ-4ATP-binding cassette, subfamily B, multidrug efflux pump. (612 aa)
ccapoly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (384 aa)
SHF49884.18-oxo-dGTP pyrophosphatase MutT, NUDIX family. (203 aa)
hslOMolecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. (329 aa)
SHF49939.18-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. (148 aa)
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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