(37 nodes) Extrinsic component of membrane network (Aspergillus parasiticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	P875_00138171	ABC1 family protein. (733 aa)
	P875_00011001	Methyltransferase domain protein. (243 aa)
	P875_00095461	PXA domain protein. (492 aa)
	COQ6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. (510 aa)
	P875_00042570	Inheritance of peroxisomes protein 1. (549 aa)
	P875_00053228	GYF domain protein. (1559 aa)
	P875_00086401	G-protein alpha subunit. (359 aa)
	P875_00042238	Vacuolar segregation subunit 7. (917 aa)
	P875_00064842	Uncharacterized protein. (317 aa)
	P875_00086403	Methyltransferase domain protein. (148 aa)
	P875_00065028	DEP domain-containing protein. (1825 aa)
	P875_00064840	Peptidase A4 family protein. (294 aa)
	P875_00011086	Uncharacterized protein. (672 aa)
	P875_00034250	Obg family GTPase CgtA. (550 aa)
	P875_00138136	Oxidoreductase NAD-binding domain protein. (379 aa)
	P875_00034316	HepA. (957 aa)
	P875_00086476	Autophagy protein Apg6. (538 aa)
	P875_00075880	UV radiation resistance protein and autophagy-related subunit 14. (616 aa)
	P875_00076028	TAP42-like family protein. (355 aa)
	P875_00076068	Uncharacterized protein. (133 aa)
	P875_00108795	Phosphatidylinositol 3-kinase VPS34. (902 aa)
	P875_00109046	Uncharacterized protein. (275 aa)
	P875_00075976	WD domain G-beta repeat. (375 aa)
	P875_00127664	GLUT4 regulating protein TUG. (508 aa)
	P875_00021651	Alpha subunit of G protein guanine nucleotide binding. (355 aa)
	P875_00010207	Ptr. (1108 aa)
	P875_00021439	Nitrogen Permease regulator of amino acid transport activity 3. (818 aa)
	P875_00021683	Alpha subunit of G protein guanine nucleotide binding. (353 aa)
	P875_00010789	Malonyl-acyl carrier protein O-methyltransferase BioC. (353 aa)
	P875_00010952	HepA. (682 aa)
	P875_00010912	COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family. (129 aa)
	P875_00010889	SMP2 like protein. (739 aa)
	P875_00064993	Metallopeptidase family M24. (516 aa)
	P875_00011005	Vacuolar protein 14 C-terminal Fig4p binding. (933 aa)
	P875_00010486	Uncharacterized protein. (1240 aa)
	P875_00010621	GGL domain protein. (84 aa)
	P875_00010560	Nitrogen permease regulator 2. (536 aa)

Your Current Organism:

Aspergillus parasiticus

NCBI taxonomy Id: 1403190
Other names: A. parasiticus SU-1, Aspergillus parasiticus SU-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COQ6	P875_00011001	A0A0F0I5G2	A0A0F0IAK3	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	Methyltransferase domain protein.	0.565
COQ6	P875_00086403	A0A0F0I5G2	A0A0F0I618	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	Methyltransferase domain protein.	0.565
COQ6	P875_00138171	A0A0F0I5G2	A0A0F0IB56	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	ABC1 family protein.	0.637
P875_00010560	P875_00011086	A0A0F0IBP7	A0A0F0IAB3	Nitrogen permease regulator 2.	Uncharacterized protein.	0.509
P875_00010560	P875_00021439	A0A0F0IBP7	A0A0F0IF60	Nitrogen permease regulator 2.	Nitrogen Permease regulator of amino acid transport activity 3.	0.998
P875_00010560	P875_00065028	A0A0F0IBP7	A0A0F0I6Z1	Nitrogen permease regulator 2.	DEP domain-containing protein.	0.997
P875_00010621	P875_00021651	A0A0F0IBS5	A0A0F0IGC7	GGL domain protein.	Alpha subunit of G protein guanine nucleotide binding.	0.932
P875_00010621	P875_00021683	A0A0F0IBS5	A0A0F0IEH7	GGL domain protein.	Alpha subunit of G protein guanine nucleotide binding.	0.839
P875_00010621	P875_00075976	A0A0F0IBS5	A0A0F0ILD6	GGL domain protein.	WD domain G-beta repeat.	0.996
P875_00010621	P875_00086401	A0A0F0IBS5	A0A0F0I809	GGL domain protein.	G-protein alpha subunit.	0.776
P875_00010889	P875_00064840	A0A0F0ICG7	A0A0F0I7K3	SMP2 like protein.	Peptidase A4 family protein.	0.666
P875_00010889	P875_00064842	A0A0F0ICG7	A0A0F0IAI2	SMP2 like protein.	Uncharacterized protein.	0.666
P875_00010889	P875_00076068	A0A0F0ICG7	A0A0F0IMN3	SMP2 like protein.	Uncharacterized protein.	0.666
P875_00010889	P875_00109046	A0A0F0ICG7	A0A0F0ILV2	SMP2 like protein.	Uncharacterized protein.	0.666
P875_00010952	P875_00011005	A0A0F0IDB5	A0A0F0IC99	HepA.	Vacuolar protein 14 C-terminal Fig4p binding.	0.589
P875_00010952	P875_00034316	A0A0F0IDB5	A0A0F0I540	HepA.	HepA.	0.897
P875_00011001	COQ6	A0A0F0IAK3	A0A0F0I5G2	Methyltransferase domain protein.	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	0.565
P875_00011001	P875_00138171	A0A0F0IAK3	A0A0F0IB56	Methyltransferase domain protein.	ABC1 family protein.	0.759
P875_00011005	P875_00010952	A0A0F0IC99	A0A0F0IDB5	Vacuolar protein 14 C-terminal Fig4p binding.	HepA.	0.589
P875_00011005	P875_00042238	A0A0F0IC99	A0A0F0I127	Vacuolar protein 14 C-terminal Fig4p binding.	Vacuolar segregation subunit 7.	0.524