81 items (Aspergillus parasiticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	P875_00021325	CID like protein. (656 aa)
	P875_00022116	Glyco_hydro_79C domain-containing protein. (536 aa)
	P875_00021679	Helicase ATP-binding domain-containing protein. (1072 aa)
	P875_00127872	Uncharacterized protein. (361 aa)
	P875_00127709	Nuclear transport factor 2 NTF2 domain protein. (162 aa)
	P875_00128044	AAA ATPase domain protein. (1438 aa)
	P875_00108823	RNA recognition motif a.k.a RRM RBD or RNP domain protein. (525 aa)
	P875_00108834	RNA recognition motif a.k.a RRM RBD or RNP domain protein. (224 aa)
	P875_00109075	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (664 aa)
	P875_00076103	RNA recognition motif a.k.a RRM RBD or RNP domain protein. (291 aa)
	P875_00076023	RNA recognition motif a.k.a RRM RBD or RNP domain protein. (160 aa)
	P875_00075990	WD domain G-beta repeat. (356 aa)
	P875_00108775	Uncharacterized protein. (571 aa)
	P875_00127878	Arabinogalactan endo-beta-1,4-galactanase. (361 aa)
	P875_00075793	RNA recognition motif a.k.a RRM RBD or RNP domain protein. (258 aa)
	P875_00076123	DEAD/DEAH box helicase. (441 aa)
	P875_00076260	Goodbye domain-containing protein. (1395 aa)
	P875_00109078	CASC3/Barentsz eIF4AIII binding. (956 aa)
	P875_00108888	RNA-dependent RNA polymerase. (1402 aa)
	P875_00010526	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (767 aa)
	P875_00011188	Uncharacterized protein. (571 aa)
	P875_00022055	Serine/threonine-protein phosphatase. (329 aa)
	P875_00010764	RNA14 like protein. (1014 aa)
	P875_00021918	DNA repair metallo-beta-lactamase. (841 aa)
	P875_00138381	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (326 aa)
	P875_00010176	RNA recognition motif in RNA-binding protein. (605 aa)
	P875_00010206	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (275 aa)
	P875_00127844	Specific transcription factor domain protein. (705 aa)
	P875_00053195	FAD_binding_2 domain-containing protein. (521 aa)
	P875_00053500	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (405 aa)
	P875_00042946	Uncharacterized protein. (226 aa)
	P875_00053649	YT521-B-like domain protein. (494 aa)
	P875_00042948	TPR like protein. (1518 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (588 aa)
	P875_00042797	PolyA polymerase central domain protein. (1194 aa)
	P875_00095459	Alpha/beta hydrolase family protein. (758 aa)
	P875_00095441	HEAT repeat. (614 aa)
	P875_00095359	Uncharacterized protein. (739 aa)
	P875_00042328	annotation not available (282 aa)
	P875_00034386	RNA recognition motif 2 in gar2. (1027 aa)
	P875_00042697	Glyco_hydro_79C domain-containing protein. (513 aa)
	P875_00034133	SrmB. (870 aa)
	P875_00042274	Nuclear cap-binding protein subunit 2. (133 aa)
	P875_00095680	ERF1 domain 2. (435 aa)
	P875_00042277	WD40 repeat protein. (487 aa)
	P875_00034341	Cleavage and polyadenylation specificity factor subunit 2. (1006 aa)
	P875_00034286	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (609 aa)
	P875_00065110	DWNN domain protein. (634 aa)
	P875_00086657	Up-frameshift suppressor 2. (1139 aa)
	P875_00086582	Methyltransferase domain protein. (244 aa)
	P875_00086503	FAD binding domain protein. (633 aa)
	P875_00064678	Zn2-Cys6 binuclear cluster domain protein. (769 aa)
	P875_00065089	RNA recognition motif a.k.a RRM RBD or RNP domain protein. (445 aa)
	P875_00034148	Sin3 associated polypeptide p18 SAP18. (265 aa)
	P875_00095477	ESSS subunit of NADH:ubiquinone oxidoreductase complex I. (115 aa)
	P875_00033987	YTH1 like protein. (255 aa)
	P875_00138404	Serine/threonine-protein phosphatase. (311 aa)
	P875_00064906	Mago binding. (218 aa)
	P875_00138301	Daxx Family protein. (626 aa)
	P875_00033872	DUF2439 domain-containing protein. (455 aa)
	P875_00138215	Growth-Arrest-Specific Protein 2 Domain. (1320 aa)
	P875_00034429	Uncharacterized protein. (614 aa)
	P875_00138112	MIF4G like. (828 aa)
	P875_00033690	Glyco_hydro_79C domain-containing protein. (255 aa)
	P875_00011174	mRNA capping enzyme. (638 aa)
	P875_00011106	TEF1 like protein. (808 aa)
	P875_00138547	Tetratricopeptide repeat. (732 aa)
	P875_00034153	YSH1 like protein. (869 aa)
	P875_00064583	Voltage-dependent anion channel. (412 aa)
	P875_00010708	Uncharacterized protein. (358 aa)
	P875_00010725	NB-ARC domain-containing protein. (1502 aa)
	P875_00033824	RNA recognition motif in the Aly/REF family protein. (300 aa)
	P875_00138543	Voltage-dependent anion channel. (674 aa)
	P875_00138445	DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (487 aa)
	P875_00010597	Fumarate reductase; Irreversibly catalyzes the reduction of fumarate to succinate. (488 aa)
	P875_00011079	TEF1 like protein. (722 aa)
	P875_00065057	mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (415 aa)
	P875_00010896	SFP1 like protein. (664 aa)
	P875_00064737	FAD binding domain protein. (493 aa)
	P875_00010631	C-terminal domain of vertebrate Tap protein. (705 aa)
	P875_00010620	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)

Your Current Organism:

Aspergillus parasiticus

NCBI taxonomy Id: 1403190
Other names: A. parasiticus SU-1, Aspergillus parasiticus SU-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLP1	P875_00010176	A0A0F0I2N3	A0A0F0IFH7	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RNA recognition motif in RNA-binding protein.	0.896
CLP1	P875_00010206	A0A0F0I2N3	A0A0F0II41	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.855
CLP1	P875_00010708	A0A0F0I2N3	A0A0F0IBA1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.702
CLP1	P875_00010764	A0A0F0I2N3	A0A0F0IE46	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RNA14 like protein.	0.933
CLP1	P875_00021325	A0A0F0I2N3	A0A0F0IFP9	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	CID like protein.	0.999
CLP1	P875_00021918	A0A0F0I2N3	A0A0F0IE57	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	DNA repair metallo-beta-lactamase.	0.765
CLP1	P875_00033824	A0A0F0I2N3	A0A0F0IBJ2	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RNA recognition motif in the Aly/REF family protein.	0.692
CLP1	P875_00033987	A0A0F0I2N3	A0A0F0I8X1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	YTH1 like protein.	0.979
CLP1	P875_00034153	A0A0F0I2N3	A0A0F0IAS9	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	YSH1 like protein.	0.895
CLP1	P875_00034286	A0A0F0I2N3	A0A0F0I6Q2	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.741
CLP1	P875_00034341	A0A0F0I2N3	A0A0F0I6I8	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Cleavage and polyadenylation specificity factor subunit 2.	0.917
CLP1	P875_00042277	A0A0F0I2N3	A0A0F0I6A4	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	WD40 repeat protein.	0.793
CLP1	P875_00042328	A0A0F0I2N3	A0A0F0I4E0	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	annotation not available	0.984
CLP1	P875_00042797	A0A0F0I2N3	A0A0F0I2Y2	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	PolyA polymerase central domain protein.	0.741
CLP1	P875_00053649	A0A0F0I2N3	A0A0F0I2E8	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	YT521-B-like domain protein.	0.943
CLP1	P875_00075793	A0A0F0I2N3	A0A0F0ILX0	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RNA recognition motif a.k.a RRM RBD or RNP domain protein.	0.710
CLP1	P875_00076123	A0A0F0I2N3	A0A0F0IMG3	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	DEAD/DEAH box helicase.	0.668
CLP1	P875_00138112	A0A0F0I2N3	A0A0F0I9Q9	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	MIF4G like.	0.769
P875_00010176	CLP1	A0A0F0IFH7	A0A0F0I2N3	RNA recognition motif in RNA-binding protein.	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	0.896
P875_00010176	P875_00010206	A0A0F0IFH7	A0A0F0II41	RNA recognition motif in RNA-binding protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.809