(5 nodes) Organic phosphonate transport network (Paenibacillus polymyxa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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protein homology

Your Input:
	phnC1	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
	phnD	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	phnC	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (256 aa)
	phnE	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
	ptxC	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)

Your Current Organism:

Paenibacillus polymyxa

NCBI taxonomy Id: 1406
Other names: ATCC 842, Aerobacillus polymyxa, Bacillus polymyxa, Bacillus sp. NCIM 2538, Bacillus sp. NCIM 2540, Bacillus sp. NCIM 2726, Bacillus sp. RP 2.2, CCUG 7426, CFBP 4258, CIP 66.22, Clostridium polymyxa, DSM 36, Granulobacter polymyxa, HAMBI 635, IAM 13419, IFO 15309, JCM 2507, LMG 13294, LMG:13294, NBRC 15309, NCCB 24016, NCIB 8158, NCIB:8158, NCTC 10343, NRRL B-4317, P. polymyxa, Paenibacillus sp. JCM 8035, Paenibacillus sp. JCM 8036, Paenibacillus sp. JCM 8037, Paenibacillus sp. JCM 8038, Paenibacillus sp. JCM 8039, Paenibacillus sp. WLY78, VKM B-514

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
phnC	phnC1	LK13_08920	LK13_01175	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
phnC	phnD	LK13_08920	LK13_08915	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
phnC	phnE	LK13_08920	LK13_08925	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
phnC	ptxC	LK13_08920	LK13_08930	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
phnC1	phnC	LK13_01175	LK13_08920	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	0.913
phnC1	phnD	LK13_01175	LK13_08915	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
phnC1	phnE	LK13_01175	LK13_08925	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
phnC1	ptxC	LK13_01175	LK13_08930	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
phnD	phnC	LK13_08915	LK13_08920	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	0.999
phnD	phnC1	LK13_08915	LK13_01175	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
phnD	phnE	LK13_08915	LK13_08925	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
phnD	ptxC	LK13_08915	LK13_08930	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
phnE	phnC	LK13_08925	LK13_08920	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	0.998
phnE	phnC1	LK13_08925	LK13_01175	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
phnE	phnD	LK13_08925	LK13_08915	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
phnE	ptxC	LK13_08925	LK13_08930	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
ptxC	phnC	LK13_08930	LK13_08920	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	0.997
ptxC	phnC1	LK13_08930	LK13_01175	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
ptxC	phnD	LK13_08930	LK13_08915	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ptxC	phnE	LK13_08930	LK13_08925	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988

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