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M1-465 M1-465 AIY11560.1 AIY11560.1 AIY08015.1 AIY08015.1 ugpA5 ugpA5 AIY08298.1 AIY08298.1 ugpA7 ugpA7 lacF1 lacF1 amyD7 amyD7 yurN3 yurN3 amyD3 amyD3 AIY08804.1 AIY08804.1 ugpA3 ugpA3 ugpA1 ugpA1 AIY10303.1 AIY10303.1 araP araP AIY10106.1 AIY10106.1 msmF1 msmF1 amyD1 amyD1 lacF7 lacF7 lacF5 lacF5 msmF3 msmF3 amyD5 amyD5 lacF3 lacF3 cebF cebF yurN1 yurN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
M1-465Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
AIY11560.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
AIY08015.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
ugpA5ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
AIY08298.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
ugpA7ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
lacF1Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
amyD7ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
yurN3ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
amyD3ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
AIY08804.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
ugpA3Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
ugpA1Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
AIY10303.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
araPArabinose transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
AIY10106.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
msmF1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
amyD1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
lacF7ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
lacF5Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
msmF3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
amyD5ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
lacF3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
cebFCytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
yurN1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
Your Current Organism:
Paenibacillus polymyxa
NCBI taxonomy Id: 1406
Other names: ATCC 842, Aerobacillus polymyxa, Bacillus polymyxa, Bacillus sp. NCIM 2538, Bacillus sp. NCIM 2540, Bacillus sp. NCIM 2726, Bacillus sp. RP 2.2, CCUG 7426, CFBP 4258, CIP 66.22, Clostridium polymyxa, DSM 36, Granulobacter polymyxa, HAMBI 635, IAM 13419, IFO 15309, JCM 2507, LMG 13294, LMG:13294, NBRC 15309, NCCB 24016, NCIB 8158, NCIB:8158, NCTC 10343, NRRL B-4317, P. polymyxa, Paenibacillus sp. JCM 8035, Paenibacillus sp. JCM 8036, Paenibacillus sp. JCM 8037, Paenibacillus sp. JCM 8038, Paenibacillus sp. JCM 8039, Paenibacillus sp. WLY78, VKM B-514
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