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phnE phnE lplB15 lplB15 lplC11 lplC11 ugpA7 ugpA7 yurM9 yurM9 yaeE yaeE araQ5 araQ5 cebF cebF tcyB tcyB ugpA5 ugpA5 yurM7 yurM7 cysT3 cysT3 potB potB potC1 potC1 cysT1 cysT1 ypdA1 ypdA1 ypcH ypcH oppB7 oppB7 oppC7 oppC7 ytcP3 ytcP3 lplB13 lplB13 lplB11 lplB11 ytcP1 ytcP1 ytlD3 ytlD3 arpJ arpJ nikC nikC nikB1 nikB1 lplB9 lplB9 lplC9 lplC9 lplC7 lplC7 lplB7 lplB7 ugpA3 ugpA3 AIY09692.1 AIY09692.1 M1-465 M1-465 lacF1 lacF1 araQ1 araQ1 ftpA ftpA oppB9 oppB9 oppC9 oppC9 nikB5 nikB5 nikC-3 nikC-3 nikB3 nikB3 nikC-2 nikC-2 tcyL tcyL msmG-2 msmG-2 amyD7 amyD7 lplB17 lplB17 lplC13 lplC13 yurN3 yurN3 malG malG msmF3 msmF3 msmG msmG cysT7 cysT7 potC3 potC3 glnP9 glnP9 glnP7 glnP7 amyD5 amyD5 AIY09025.1 AIY09025.1 amyD3 amyD3 amyC5 amyC5 cysT5 cysT5 cysW cysW ptxC ptxC oppB5 oppB5 occM3 occM3 ytmL ytmL lplC5 lplC5 lplB5 lplB5 ugpE3 ugpE3 lacF3 lacF3 pstA pstA pstC pstC AIY10531.1 AIY10531.1 ugpE1 ugpE1 ugpA1 ugpA1 oppC3 oppC3 dppB dppB lplC3 lplC3 lplB3 lplB3 occM1 occM1 oppB3 oppB3 dppC1 dppC1 metI1 metI1 glnP5 glnP5 araQ3 araQ3 araP araP yecS yecS AIY10107.1 AIY10107.1 AIY10106.1 AIY10106.1 amyC3 amyC3 msmF1 msmF1 lplC1 lplC1 lplB1 lplB1 amyC1 amyC1 amyD1 amyD1 metI metI ytlD1 ytlD1 glnP3 glnP3 glnP1 glnP1 oppC1 oppC1 oppB1 oppB1 yurM3 yurM3 lacF7 lacF7 yurM1 yurM1 lacF5 lacF5 lacG lacG yurM5 yurM5 yurN1 yurN1 oppC5 oppC5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
phnEPhosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
lplB15Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
lplC11Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
ugpA7ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
yurM9Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
yaeEMetal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
araQ5Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
cebFCytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
tcyBCysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
ugpA5ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
yurM7Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
cysT3Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (225 aa)
potBSpermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
potC1Spermidine/purescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
cysT1Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (221 aa)
ypdA1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
ypcHSugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
oppB7Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
oppC7Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
ytcP3ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
lplB13Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
lplB11Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
ytcP1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
ytlD3ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
arpJAmino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
nikCNickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
nikB1Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
lplB9Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
lplC9ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
lplC7Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
lplB7Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
ugpA3Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
AIY09692.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
M1-465Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
lacF1Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
araQ1Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
ftpAABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)
oppB9Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
oppC9Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
nikB5Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
nikC-3Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
nikB3Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
nikC-2Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
tcyLAmino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
msmG-2Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
amyD7ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
lplB17Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
lplC13Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
yurN3ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
malGSugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
msmF3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
msmGABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
cysT7Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
potC3Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
glnP9Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
glnP7Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
amyD5ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
AIY09025.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
amyD3ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
amyC5Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
cysT5Sulfate transporter; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. (277 aa)
cysWPart of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
ptxCPhosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
oppB5Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
occM3Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
ytmLCysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
lplC5ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
lplB5Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
ugpE3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
lacF3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
pstAPhosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
pstCPhosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (310 aa)
AIY10531.1Glycine/betaine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (864 aa)
ugpE1Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
ugpA1Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
oppC3Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
dppBPeptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
lplC3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
lplB3ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
occM1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
oppB3Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
dppC1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
metI1Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
glnP5Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
araQ3Arabinose transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
araPArabinose transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
yecSABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
AIY10107.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
AIY10106.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
amyC3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
msmF1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
lplC1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
lplB1Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
amyC1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
amyD1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
metIMethionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
ytlD1Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
glnP3Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
glnP1Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
oppC1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
oppB1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
yurM3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
lacF7ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
yurM1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
lacF5Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
lacGSugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
yurM5Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
yurN1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
oppC5Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
Your Current Organism:
Paenibacillus polymyxa
NCBI taxonomy Id: 1406
Other names: ATCC 842, Aerobacillus polymyxa, Bacillus polymyxa, Bacillus sp. NCIM 2538, Bacillus sp. NCIM 2540, Bacillus sp. NCIM 2726, Bacillus sp. RP 2.2, CCUG 7426, CFBP 4258, CIP 66.22, Clostridium polymyxa, DSM 36, Granulobacter polymyxa, HAMBI 635, IAM 13419, IFO 15309, JCM 2507, LMG 13294, LMG:13294, NBRC 15309, NCCB 24016, NCIB 8158, NCIB:8158, NCTC 10343, NRRL B-4317, P. polymyxa, Paenibacillus sp. JCM 8035, Paenibacillus sp. JCM 8036, Paenibacillus sp. JCM 8037, Paenibacillus sp. JCM 8038, Paenibacillus sp. JCM 8039, Paenibacillus sp. WLY78, VKM B-514
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