STRINGSTRING
AMW77495.1 AMW77495.1 AMW77610.1 AMW77610.1 AMW77611.1 AMW77611.1 AMW77613.1 AMW77613.1 lpxL lpxL bamE bamE fur fur lolA lolA AMW78223.1 AMW78223.1 AMW78224.1 AMW78224.1 bamD bamD AMD27_05010 AMD27_05010 AMW78303.1 AMW78303.1 lolD lolD AMW78311.1 AMW78311.1 AMW78498.1 AMW78498.1 AMW78499.1 AMW78499.1 AMW78500.1 AMW78500.1 lptA lptA AMW78502.1 AMW78502.1 lpxB lpxB lpxA lpxA lpxD lpxD bamA bamA lpxH lpxH ftsB ftsB kdsA kdsA AMW79112.1 AMW79112.1 rpsA rpsA cmk cmk AMW79116.1 AMW79116.1 tadA tadA AMW79118.1 AMW79118.1 ung ung AMW79121.1 AMW79121.1 AMW79122.1 AMW79122.1 AMW80391.1 AMW80391.1 AMW79123.1 AMW79123.1 AMW79124.1 AMW79124.1 AMW79125.1 AMW79125.1 kdsB kdsB lpxK lpxK msbA msbA AMW79131.1 AMW79131.1 AMW79132.1 AMW79132.1 AMW79133.1 AMW79133.1 AMW79134.1 AMW79134.1 rsmG rsmG AMW79136.1 AMW79136.1 AMW79137.1 AMW79137.1 lptD lptD surA surA AMW79415.1 AMW79415.1 AMW79715.1 AMW79715.1 ftsL ftsL AMW80111.1 AMW80111.1 lpxC lpxC ftsQ ftsQ dsbB dsbB AMW80210.1 AMW80210.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMW77495.1Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
AMW77610.1LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
AMW77611.1LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
AMW77613.1Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
lpxLLauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). (311 aa)
bamEHypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (132 aa)
furTranscriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (145 aa)
lolAOuter membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (232 aa)
AMW78223.1Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (193 aa)
AMW78224.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
bamDCompetence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (339 aa)
AMD27_05010Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
AMW78303.1Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
lolDLipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. (225 aa)
AMW78311.1Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
AMW78498.1D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
AMW78499.13-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. (181 aa)
AMW78500.1LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
lptALPS ABC transporter substrate-binding protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. (186 aa)
AMW78502.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
lpxBlipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (390 aa)
lpxAacyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (262 aa)
lpxDUDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (356 aa)
bamAOuter membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (835 aa)
lpxHUDP-2,3-diacylglucosamine diphosphatase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (239 aa)
ftsBCell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. (129 aa)
kdsA3-deoxy-8-phosphooctulonate synthase; Catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family. (285 aa)
AMW79112.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
rpsA30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (558 aa)
cmkCytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
AMW79116.1Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
tadAtRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (175 aa)
AMW79118.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
unguracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (237 aa)
AMW79121.1General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
AMW79122.1Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AMW80391.1Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
AMW79123.1Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
AMW79124.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
AMW79125.1Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (253 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (336 aa)
msbALipid ABC transporter permease/ATP-binding protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (574 aa)
AMW79131.1Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
AMW79132.1Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
AMW79133.1Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family. (296 aa)
AMW79134.1Cobalamin biosynthesis protein CobQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
rsmG16S rRNA methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (210 aa)
AMW79136.1Nucleotidyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
AMW79137.1Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
lptDLPS export ABC transporter periplasmic protein LptC; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (827 aa)
surAPeptidylprolyl isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (432 aa)
AMW79415.1DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
AMW79715.1Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
ftsLCell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. (111 aa)
AMW80111.13-deoxy-D-manno-2-octulosonate transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (426 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (300 aa)
ftsQCell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. (284 aa)
dsbBDihydrolipoamide acetyltransferase; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. (165 aa)
AMW80210.1Lipoprotein-34 precursor (NlpB); Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
Your Current Organism:
Acinetobacter sp. TGLY2
NCBI taxonomy Id: 1407071
Other names: A. sp. TGL-Y2, Acinetobacter sp. TGL-Y2
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