(13 nodes) L-amino acid transport network (Acinetobacter sp. TGLY2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMW79107.1	Branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
	gltS	Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. (406 aa)
	gltS-2	Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. (407 aa)
	AMW79502.1	Sodium:proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (496 aa)
	gltS-3	Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. (409 aa)
	AMW79951.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	AMW80149.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
	AMW79955.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	AMW80304.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	AMW78562.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
	AMW78675.1	Branched-chain amino acid ABC transporter substrate-binding protein; Component of the transport system for branched-chain amino acids. (430 aa)
	AMW79049.1	Sodium:proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (504 aa)
	AMW79106.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)

Your Current Organism:

Acinetobacter sp. TGLY2

NCBI taxonomy Id: 1407071
Other names: A. sp. TGL-Y2, Acinetobacter sp. TGL-Y2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMW79106.1	AMW79107.1	AMD27_09535	AMD27_09540	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
AMW79107.1	AMW79106.1	AMD27_09540	AMD27_09535	Branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
AMW79951.1	AMW79955.1	AMD27_14285	AMD27_14305	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AMW79951.1	AMW80149.1	AMD27_14285	AMD27_15415	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
AMW79955.1	AMW79951.1	AMD27_14305	AMD27_14285	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AMW80149.1	AMW79951.1	AMD27_15415	AMD27_14285	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790