STRINGSTRING
tsgD2 tsgD2 tsgC2 tsgC2 tsgB2 tsgB2 tsgA2 tsgA2 ugpB ugpB ugpA ugpA ugpE ugpE ugpC ugpC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tsgD2ABC-type transport system ATP-binding protein (probable substrate sugar). (379 aa)
tsgC2ABC-type transport system permease protein (probable substrate sugar). (286 aa)
tsgB2ABC-type transport system permease protein (probable substrate sugar). (341 aa)
tsgA2ABC-type transport system periplasmic substrate-binding protein (probable substrate sugar). (428 aa)
ugpBABC-type transport system periplasmic substrate-binding protein (probable substrate glycerol-3-phosphate). (453 aa)
ugpAABC-type transport system permease protein (probable substrate glycerol-3-phosphate). (297 aa)
ugpEABC-type transport system permease protein (probable substrate glycerol-3-phosphate). (288 aa)
ugpCABC-type transport system ATP-binding protein (probable substrate glycerol-3-phosphate). (377 aa)
Your Current Organism:
Halobacterium hubeiense
NCBI taxonomy Id: 1407499
Other names: H. hubeiense, HAMBI 3616, Halobacterium sp. JI20-1, strain JI20-1
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