7 items (Halobacterium hubeiense) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HHUB_1033	Peptidase M20 family protein. (409 aa)
	HHUB_1134	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase). (363 aa)
	dapE	Succinyl-diaminopimelate desuccinylase. (356 aa)
	argH	Argininosuccinate lyase. (506 aa)
	argC	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. (346 aa)
	argE	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. (336 aa)
	argF	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. (293 aa)

Your Current Organism:

Halobacterium hubeiense

NCBI taxonomy Id: 1407499
Other names: H. hubeiense, HAMBI 3616, Halobacterium sp. JI20-1, strain JI20-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HHUB_1033	HHUB_1134	HHUB_1033	HHUB_1134	Peptidase M20 family protein.	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	0.929
HHUB_1033	argC	HHUB_1033	HHUB_3649	Peptidase M20 family protein.	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	0.567
HHUB_1033	argE	HHUB_1033	HHUB_3652	Peptidase M20 family protein.	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	0.966
HHUB_1033	argF	HHUB_1033	HHUB_3653	Peptidase M20 family protein.	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	0.913
HHUB_1033	dapE	HHUB_1033	HHUB_1586	Peptidase M20 family protein.	Succinyl-diaminopimelate desuccinylase.	0.926
HHUB_1134	HHUB_1033	HHUB_1134	HHUB_1033	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	Peptidase M20 family protein.	0.929
HHUB_1134	argC	HHUB_1134	HHUB_3649	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	0.573
HHUB_1134	argE	HHUB_1134	HHUB_3652	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	0.926
HHUB_1134	argF	HHUB_1134	HHUB_3653	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	0.913
HHUB_1134	argH	HHUB_1134	HHUB_3646	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	Argininosuccinate lyase.	0.418
HHUB_1134	dapE	HHUB_1134	HHUB_1586	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	Succinyl-diaminopimelate desuccinylase.	0.921
argC	HHUB_1033	HHUB_3649	HHUB_1033	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	Peptidase M20 family protein.	0.567
argC	HHUB_1134	HHUB_3649	HHUB_1134	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	0.573
argC	argE	HHUB_3649	HHUB_3652	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	0.991
argC	argF	HHUB_3649	HHUB_3653	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	0.983
argC	argH	HHUB_3649	HHUB_3646	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	Argininosuccinate lyase.	0.999
argC	dapE	HHUB_3649	HHUB_1586	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	Succinyl-diaminopimelate desuccinylase.	0.616
argE	HHUB_1033	HHUB_3652	HHUB_1033	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	Peptidase M20 family protein.	0.966
argE	HHUB_1134	HHUB_3652	HHUB_1134	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	0.926
argE	argC	HHUB_3652	HHUB_3649	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.	0.991