5 items (Halobacterium hubeiense) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HHUB_1033	Peptidase M20 family protein. (409 aa)
	HHUB_1134	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase). (363 aa)
	dapE	Succinyl-diaminopimelate desuccinylase. (356 aa)
	HHUB_1609	M20 family amidohydrolase (homolog to indole-3-acetyl-aspartate hydrolase). (426 aa)
	argE	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. (336 aa)

Your Current Organism:

Halobacterium hubeiense

NCBI taxonomy Id: 1407499
Other names: H. hubeiense, HAMBI 3616, Halobacterium sp. JI20-1, strain JI20-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HHUB_1033	HHUB_1134	HHUB_1033	HHUB_1134	Peptidase M20 family protein.	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	0.929
HHUB_1033	argE	HHUB_1033	HHUB_3652	Peptidase M20 family protein.	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	0.966
HHUB_1033	dapE	HHUB_1033	HHUB_1586	Peptidase M20 family protein.	Succinyl-diaminopimelate desuccinylase.	0.926
HHUB_1134	HHUB_1033	HHUB_1134	HHUB_1033	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	Peptidase M20 family protein.	0.929
HHUB_1134	argE	HHUB_1134	HHUB_3652	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	0.926
HHUB_1134	dapE	HHUB_1134	HHUB_1586	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	Succinyl-diaminopimelate desuccinylase.	0.921
argE	HHUB_1033	HHUB_3652	HHUB_1033	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	Peptidase M20 family protein.	0.966
argE	HHUB_1134	HHUB_3652	HHUB_1134	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	0.926
argE	dapE	HHUB_3652	HHUB_1586	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	Succinyl-diaminopimelate desuccinylase.	0.923
dapE	HHUB_1033	HHUB_1586	HHUB_1033	Succinyl-diaminopimelate desuccinylase.	Peptidase M20 family protein.	0.926
dapE	HHUB_1134	HHUB_1586	HHUB_1134	Succinyl-diaminopimelate desuccinylase.	Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase).	0.921
dapE	argE	HHUB_1586	HHUB_3652	Succinyl-diaminopimelate desuccinylase.	Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.	0.923