STRINGSTRING
HHUB_1033 HHUB_1033 citB1 citB1 HHUB_1134 HHUB_1134 dapE dapE pabC pabC aspC4 aspC4 aspC3 aspC3 aspC2 aspC2 aspC6 aspC6 asd asd leuB1 leuB1 leuD leuD leuC leuC ilvC ilvC ilvN ilvN ilvB ilvB leuA1 leuA1 ilvD ilvD icd icd citZ citZ ilvE ilvE argX argX argC argC argB argB argD argD argE argE lysC lysC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HHUB_1033Peptidase M20 family protein. (409 aa)
citB1Aconitate hydratase; Gene: hly; product: serine protease halolysin (nonfunctional); EC_number: 3.4.21.-; gene has a frameshift. (661 aa)
HHUB_1134Peptidase M20 family protein (homolog to succinyl-diaminopimelate desuccinylase). (363 aa)
dapESuccinyl-diaminopimelate desuccinylase. (356 aa)
pabCAminodeoxychorismate lyase. (284 aa)
aspC4Pyridoxal phosphate-dependent aminotransferase. (368 aa)
aspC3Pyridoxal phosphate-dependent aminotransferase. (380 aa)
aspC2Pyridoxal phosphate-dependent aminotransferase. (373 aa)
aspC6Pyridoxal phosphate-dependent aminotransferase. (385 aa)
asdAspartate-semialdehyde dehydrogenase. (343 aa)
leuB13-isopropylmalate dehydrogenase. (329 aa)
leuD3-isopropylmalate dehydratase small subunit. (204 aa)
leuC3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (474 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (350 aa)
ilvNAcetolactate synthase small subunit. (209 aa)
ilvBAcetolactate synthase large subunit. (590 aa)
leuA12-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (399 aa)
ilvDDihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (586 aa)
icdIsocitrate dehydrogenase (NADP). (419 aa)
citZCitrate synthase. (378 aa)
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (308 aa)
argXProbable glutamate--argW ligase. (288 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. (346 aa)
argBAcetylglutamate kinase; Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis); Belongs to the acetylglutamate kinase family. LysZ subfamily. (278 aa)
argDAcetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily. (370 aa)
argEAcetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. (336 aa)
lysCAspartate kinase; Belongs to the aspartokinase family. (394 aa)
Your Current Organism:
Halobacterium hubeiense
NCBI taxonomy Id: 1407499
Other names: H. hubeiense, HAMBI 3616, Halobacterium sp. JI20-1, strain JI20-1
Server load: low (38%) [HD]