34 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_9475	60S ribosomal protein L35. (136 aa)
	T310_7507	RNA processing factor 1. (436 aa)
	T310_10223	Ribosome biogenesis protein Urb1. (862 aa)
	T310_9468	RNA helicase; Belongs to the DEAD box helicase family. (501 aa)
	T310_9357	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (441 aa)
	T310_9098	60S ribosome biogenesis protein Brx1. (132 aa)
	T310_9099	Uncharacterized protein. (101 aa)
	T310_5513	RAI1 domain-containing protein. (216 aa)
	T310_0293	rRNA biogenesis protein RRP5. (1830 aa)
	T310_0418	Ribosome biogenesis protein NSA2. (258 aa)
	T310_0579	Protein MAK16; Belongs to the MAK16 family. (335 aa)
	T310_0349	Ribosomal biogenesis protein Gar2. (444 aa)
	T310_5424	RNA-binding protein required for biogenesis of the ribosomal 60S subunit. (139 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (444 aa)
	T310_4340	HIT finger domain protein. (192 aa)
	T310_4153	Uncharacterized protein. (321 aa)
	T310_3209	Uncharacterized protein. (366 aa)
	T310_3837	60S ribosomal protein L7. (251 aa)
	T310_3327	Uncharacterized protein. (411 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (691 aa)
	T310_3297	RNA helicase. (615 aa)
	T310_3210	Uncharacterized protein. (400 aa)
	T310_0322	HIT finger domain protein. (448 aa)
	T310_6484	tRNA and rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (786 aa)
	T310_2937	Cytosolic large ribosomal subunit protein L7A. (413 aa)
	T310_2372	RNA helicase. (643 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (796 aa)
	T310_1954	GTP binding protein. (562 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. Belongs to the class I-like SAM-binding methyltransferase superfamily. DOT1 family. (1445 aa)
	T310_1006	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	T310_0687	Uncharacterized protein; Belongs to the DEAD box helicase family. (1159 aa)
	T310_0361	Ribosome biogenesis (Nop4). (764 aa)
	T310_7555	Ribosome biogenesis protein. (335 aa)
	T310_8202	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (238 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	A0A0F4Z0A7	A0A0F4YYD5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	SPB1	A0A0F4Z0A7	A0A0F4Z1B0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	AdoMet-dependent rRNA methyltransferase SPB1; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. Belongs to the class I-like SAM-binding methyltransferase superfamily. DOT1 family.	0.992
ERB1	T310_0293	A0A0F4Z0A7	A0A0F4Z719	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA biogenesis protein RRP5.	0.939
ERB1	T310_0349	A0A0F4Z0A7	A0A0F4Z5M4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal biogenesis protein Gar2.	0.986
ERB1	T310_0361	A0A0F4Z0A7	A0A0F4Z557	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis (Nop4).	0.948
ERB1	T310_0418	A0A0F4Z0A7	A0A0F4Z6M7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein NSA2.	0.987
ERB1	T310_0579	A0A0F4Z0A7	A0A0F4Z5M7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.961
ERB1	T310_0687	A0A0F4Z0A7	A0A0F4Z430	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.920
ERB1	T310_1006	A0A0F4Z0A7	A0A0F4Z388	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.636
ERB1	T310_10223	A0A0F4Z0A7	A0A0F4YDC8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein Urb1.	0.778
ERB1	T310_1954	A0A0F4Z0A7	A0A0F4Z0W5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	GTP binding protein.	0.998
ERB1	T310_2372	A0A0F4Z0A7	A0A0F4YZP9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA helicase.	0.971
ERB1	T310_2937	A0A0F4Z0A7	A0A0F4YZI7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Cytosolic large ribosomal subunit protein L7A.	0.945
ERB1	T310_3209	A0A0F4Z0A7	A0A0F4YWT4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.775
ERB1	T310_3210	A0A0F4Z0A7	A0A0F4YYQ5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.785
ERB1	T310_3297	A0A0F4Z0A7	A0A0F4YYI5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA helicase.	0.948
ERB1	T310_3327	A0A0F4Z0A7	A0A0F4YX42	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.991
ERB1	T310_3837	A0A0F4Z0A7	A0A0F4YX17	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L7.	0.996
ERB1	T310_4153	A0A0F4Z0A7	A0A0F4YU46	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.892
ERB1	T310_5424	A0A0F4Z0A7	A0A0F4YQL6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA-binding protein required for biogenesis of the ribosomal 60S subunit.	0.932