11 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	T310_8015	U5 snRNP component Snu114. (988 aa)
	T310_8142	GYF domain-containing protein. (466 aa)
	T310_7844	MPN domain-containing protein. (2332 aa)
	T310_7879	mRNA splicing factor (Prp18). (389 aa)
	T310_8130	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (120 aa)
	T310_4299	Sm domain-containing protein. (230 aa)
	T310_0093	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
	T310_0602	AAR2 family protein. (480 aa)
	T310_2185	Pre-mRNA splicing helicase. (2143 aa)
	T310_3200	Small nuclear ribonucleoprotein Sm D2. (176 aa)
	T310_6886	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (165 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_0093	T310_2185	A0A0F4Z6D5	A0A0F4Z1J7	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Pre-mRNA splicing helicase.	0.994
T310_0093	T310_3200	A0A0F4Z6D5	A0A0F4YYP6	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
T310_0093	T310_4299	A0A0F4Z6D5	A0A0F4YUA0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Sm domain-containing protein.	0.998
T310_0093	T310_6886	A0A0F4Z6D5	A0A0F4YMV3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.975
T310_0093	T310_7844	A0A0F4Z6D5	A0A0F4YJC5	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	MPN domain-containing protein.	0.993
T310_0093	T310_7879	A0A0F4Z6D5	A0A0F4YJ98	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	mRNA splicing factor (Prp18).	0.781
T310_0093	T310_8015	A0A0F4Z6D5	A0A0F4YKA8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U5 snRNP component Snu114.	0.996
T310_0093	T310_8130	A0A0F4Z6D5	A0A0F4YII3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
T310_0093	T310_8142	A0A0F4Z6D5	A0A0F4YJZ2	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	GYF domain-containing protein.	0.790
T310_0602	T310_2185	A0A0F4Z494	A0A0F4Z1J7	AAR2 family protein.	Pre-mRNA splicing helicase.	0.893
T310_0602	T310_4299	A0A0F4Z494	A0A0F4YUA0	AAR2 family protein.	Sm domain-containing protein.	0.694
T310_0602	T310_7844	A0A0F4Z494	A0A0F4YJC5	AAR2 family protein.	MPN domain-containing protein.	0.987
T310_0602	T310_8015	A0A0F4Z494	A0A0F4YKA8	AAR2 family protein.	U5 snRNP component Snu114.	0.938
T310_0602	T310_8130	A0A0F4Z494	A0A0F4YII3	AAR2 family protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.413
T310_0602	T310_8142	A0A0F4Z494	A0A0F4YJZ2	AAR2 family protein.	GYF domain-containing protein.	0.832
T310_2185	T310_0093	A0A0F4Z1J7	A0A0F4Z6D5	Pre-mRNA splicing helicase.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.994
T310_2185	T310_0602	A0A0F4Z1J7	A0A0F4Z494	Pre-mRNA splicing helicase.	AAR2 family protein.	0.893
T310_2185	T310_3200	A0A0F4Z1J7	A0A0F4YYP6	Pre-mRNA splicing helicase.	Small nuclear ribonucleoprotein Sm D2.	0.993
T310_2185	T310_4299	A0A0F4Z1J7	A0A0F4YUA0	Pre-mRNA splicing helicase.	Sm domain-containing protein.	0.994
T310_2185	T310_6886	A0A0F4Z1J7	A0A0F4YMV3	Pre-mRNA splicing helicase.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.995