STRINGSTRING
T310_0325 T310_0325 T310_0547 T310_0547 T310_0755 T310_0755 T310_0087 T310_0087 T310_0057 T310_0057 T310_0579 T310_0579 T310_0349 T310_0349 T310_0833 T310_0833 T310_0212 T310_0212 T310_0270 T310_0270 T310_0679 T310_0679 T310_0923 T310_0923 T310_0292 T310_0292 T310_0903 T310_0903 T310_0299 T310_0299 T310_0448 T310_0448 T310_10223 T310_10223 T310_10123 T310_10123 T310_10027 T310_10027 T310_9803 T310_9803 T310_10065 T310_10065 T310_10024 T310_10024 T310_9612 T310_9612 T310_10121 T310_10121 T310_9468 T310_9468 T310_9630 T310_9630 T310_9754 T310_9754 T310_9483 T310_9483 T310_9764 T310_9764 T310_9989 T310_9989 T310_9403 T310_9403 T310_9635 T310_9635 T310_9395 T310_9395 T310_9346 T310_9346 T310_9351 T310_9351 T310_9357 T310_9357 T310_8984 T310_8984 T310_9099 T310_9099 T310_8909 T310_8909 T310_8904 T310_8904 T310_8988 T310_8988 T310_9550 T310_9550 T310_8516 T310_8516 T310_9250 T310_9250 T310_9098 T310_9098 T310_8169 T310_8169 T310_8488 T310_8488 T310_8202 T310_8202 T310_7966 T310_7966 T310_7959 T310_7959 T310_8113 T310_8113 T310_7891 T310_7891 T310_7930 T310_7930 T310_7792 T310_7792 T310_7899 T310_7899 T310_7874 T310_7874 T310_8315 T310_8315 T310_7557 T310_7557 T310_7533 T310_7533 T310_7478 T310_7478 T310_7890 T310_7890 T310_7895 T310_7895 T310_7591 T310_7591 T310_7859 T310_7859 T310_7555 T310_7555 T310_7412 T310_7412 T310_7807 T310_7807 T310_7507 T310_7507 T310_7476 T310_7476 T310_7995 T310_7995 T310_7312 T310_7312 T310_7330 T310_7330 T310_7286 T310_7286 T310_7613 T310_7613 T310_7884 T310_7884 T310_7341 T310_7341 T310_7556 T310_7556 T310_7532 T310_7532 T310_7089 T310_7089 T310_7287 T310_7287 T310_7016 T310_7016 T310_7406 T310_7406 T310_7044 T310_7044 T310_7185 T310_7185 T310_6749 T310_6749 T310_6783 T310_6783 T310_6865 T310_6865 T310_6696 T310_6696 T310_6578 T310_6578 T310_6752 T310_6752 T310_6928 T310_6928 T310_6535 T310_6535 T310_6511 T310_6511 T310_6881 T310_6881 T310_6601 T310_6601 T310_6419 T310_6419 T310_6507 T310_6507 T310_6484 T310_6484 T310_6238 T310_6238 T310_6648 T310_6648 T310_6098 T310_6098 T310_6074 T310_6074 T310_6655 T310_6655 T310_6080 T310_6080 T310_5877 T310_5877 T310_5983 T310_5983 T310_6455 T310_6455 T310_5801 T310_5801 T310_6153 T310_6153 T310_6354 T310_6354 T310_5984 T310_5984 T310_5696 T310_5696 T310_5625 T310_5625 T310_5424 T310_5424 T310_6001 T310_6001 T310_5334 T310_5334 T310_5247 T310_5247 T310_5886 T310_5886 T310_5180 T310_5180 T310_5177 T310_5177 T310_5389 T310_5389 T310_4877 T310_4877 T310_5338 T310_5338 T310_5514 T310_5514 T310_5273 T310_5273 T310_4759 T310_4759 T310_4888 T310_4888 T310_4631 T310_4631 YTM1 YTM1 T310_4808 T310_4808 T310_4638 T310_4638 T310_5213 T310_5213 T310_5183 T310_5183 T310_4746 T310_4746 T310_4892 T310_4892 T310_4939 T310_4939 T310_4406 T310_4406 T310_4311 T310_4311 T310_4894 T310_4894 T310_4635 T310_4635 T310_4348 T310_4348 T310_4115 T310_4115 T310_4402 T310_4402 T310_4412 T310_4412 T310_4088 T310_4088 TIF6 TIF6 T310_4113 T310_4113 T310_4064 T310_4064 T310_4079 T310_4079 T310_4288 T310_4288 T310_3986 T310_3986 T310_3859 T310_3859 T310_3732 T310_3732 T310_3593 T310_3593 T310_4028 T310_4028 T310_3605 T310_3605 T310_3677 T310_3677 T310_3630 T310_3630 T310_3866 T310_3866 T310_3731 T310_3731 T310_3321 T310_3321 T310_3331 T310_3331 T310_3238 T310_3238 T310_3327 T310_3327 T310_3073 T310_3073 T310_3530 T310_3530 T310_3459 T310_3459 T310_2969 T310_2969 T310_2813 T310_2813 T310_3527 T310_3527 T310_2858 T310_2858 T310_3277 T310_3277 T310_2804 T310_2804 T310_2745 T310_2745 T310_2692 T310_2692 T310_2702 T310_2702 T310_2836 T310_2836 NOP7 NOP7 T310_3297 T310_3297 T310_2748 T310_2748 T310_3119 T310_3119 T310_2842 T310_2842 T310_2501 T310_2501 T310_2793 T310_2793 T310_2355 T310_2355 T310_2442 T310_2442 T310_2437 T310_2437 T310_2691 T310_2691 T310_2372 T310_2372 T310_2382 T310_2382 T310_2805 T310_2805 T310_2786 T310_2786 T310_2044 T310_2044 ERB1 ERB1 T310_2534 T310_2534 T310_1967 T310_1967 T310_1954 T310_1954 T310_1804 T310_1804 T310_2136 T310_2136 SPB1 SPB1 T310_1686 T310_1686 T310_2301 T310_2301 T310_2065 T310_2065 T310_1769 T310_1769 T310_1560 T310_1560 T310_2020 T310_2020 T310_2030 T310_2030 T310_1735 T310_1735 T310_1775 T310_1775 T310_1301 T310_1301 T310_1880 T310_1880 T310_1699 T310_1699 T310_1900 T310_1900 T310_1209 T310_1209 T310_1800 T310_1800 T310_1315 T310_1315 T310_1542 T310_1542 T310_1269 T310_1269 T310_1447 T310_1447 FEN1 FEN1 T310_0874 T310_0874 T310_0892 T310_0892 T310_1583 T310_1583 NAT10 NAT10 T310_0947 T310_0947 T310_1449 T310_1449 T310_1180 T310_1180 T310_0687 T310_0687 T310_0649 T310_0649 T310_0845 T310_0845 T310_0617 T310_0617 LSM5 LSM5 T310_0493 T310_0493 T310_0293 T310_0293 T310_0367 T310_0367 T310_0064 T310_0064 T310_0224 T310_0224 T310_0418 T310_0418 T310_0586 T310_0586 T310_0036 T310_0036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_0325Protease. (998 aa)
T310_0547Uncharacterized protein. (221 aa)
T310_0755ATP-dependent RNA helicase (Hrh1). (805 aa)
T310_0087Nucleolar GTP-binding protein 1. (1073 aa)
T310_0057KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (373 aa)
T310_0579Protein MAK16; Belongs to the MAK16 family. (335 aa)
T310_0349Ribosomal biogenesis protein Gar2. (444 aa)
T310_0833Uncharacterized protein. (235 aa)
T310_0212U3 small nucleolar RNA-associated protein 22. (1129 aa)
T310_0270rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (106 aa)
T310_0679DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (130 aa)
T310_0923DNA-directed RNA polymerase. (160 aa)
T310_0292Uncharacterized protein. (315 aa)
T310_0903Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (309 aa)
T310_0299RNase_PH domain-containing protein. (393 aa)
T310_0448Oxidoreductase, 2OG-Fe(II) oxygenase family; Belongs to the iron/ascorbate-dependent oxidoreductase family. (667 aa)
T310_10223Ribosome biogenesis protein Urb1. (862 aa)
T310_10123Uncharacterized protein. (300 aa)
T310_10027Notchless-like WD40 repeat-containing protein. (515 aa)
T310_9803rRNA processing protein. (302 aa)
T310_10065Sialidase domain-containing protein. (348 aa)
T310_10024DNA topoisomerase. (278 aa)
T310_9612Uncharacterized protein. (639 aa)
T310_10121Uncharacterized protein. (192 aa)
T310_9468RNA helicase; Belongs to the DEAD box helicase family. (501 aa)
T310_9630Nucleolar RNAse III. (429 aa)
T310_9754Ribosome biogenesis protein Kri1. (674 aa)
T310_9483PUM-HD domain-containing protein. (715 aa)
T310_9764rRNA-processing protein efg1. (324 aa)
T310_9989Sas10 domain-containing protein. (676 aa)
T310_9403Uncharacterized protein. (98 aa)
T310_9635Protein pxr1. (294 aa)
T310_9395Uncharacterized protein. (522 aa)
T310_9346Pre-rRNA processing protein Esf1. (726 aa)
T310_9351DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (119 aa)
T310_9357Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (441 aa)
T310_8984Nucleolin protein Nsr1. (145 aa)
T310_9099Uncharacterized protein. (101 aa)
T310_8909F-box domain protein. (365 aa)
T310_8904Conserved lysine-rich protein. (180 aa)
T310_8988Uncharacterized protein. (221 aa)
T310_9550Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4906 aa)
T310_8516Uncharacterized protein. (233 aa)
T310_9250Exosome-associated protein. (277 aa)
T310_909860S ribosome biogenesis protein Brx1. (132 aa)
T310_8169Small nucleolar ribonucleoprotein complex component (Utp5). (863 aa)
T310_8488PH domain-containing protein. (340 aa)
T310_8202Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (238 aa)
T310_7966Uncharacterized protein. (391 aa)
T310_7959Ribonuclease P protein subunit. (236 aa)
T310_8113RNA binding protein. (305 aa)
T310_7891Ribosome biogenesis protein Ssf2. (363 aa)
T310_7930Ribosome biogenesis protein RLP24. (191 aa)
T310_7792Fibrillarin. (683 aa)
T310_7899Uncharacterized protein. (315 aa)
T310_7874DEAD/DEAH box helicase. (907 aa)
T310_8315Uncharacterized protein. (239 aa)
T310_7557Radical_SAM domain-containing protein. (259 aa)
T310_7533U3 small nucleolar ribonucleoprotein IMP4. (411 aa)
T310_7478Uncharacterized protein. (1280 aa)
T310_7890ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. (472 aa)
T310_7895Small nucleolar ribonucleoprotein complex subunit. (449 aa)
T310_7591Thioredoxin. (578 aa)
T310_7859Uncharacterized protein. (275 aa)
T310_7555Ribosome biogenesis protein. (335 aa)
T310_7412SRP9-21 domain-containing protein. (190 aa)
T310_7807RNA polymerase I specific transcription initiation factor RRN3 superfamily. (694 aa)
T310_7507RNA processing factor 1. (436 aa)
T310_7476RNA polymerase I subunit Rpa43. (425 aa)
T310_7995Ribonucleases P/MRP protein subunit. (1210 aa)
T310_73123' exoribonuclease family protein. (408 aa)
T310_7330DEAH-box RNA helicase (Dhr1). (1233 aa)
T310_7286Small nucleolar ribonucleoprotein complex subunit. (514 aa)
T310_7613Uncharacterized protein. (310 aa)
T310_7884U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
T310_7341Small nucleolar ribonucleoprotein complex subunit Utp15. (542 aa)
T310_7556WD_REPEATS_REGION domain-containing protein. (1429 aa)
T310_7532BRCT domain protein. (467 aa)
T310_7089ToxD protein. (541 aa)
T310_7287Pre-rRNA processing protein Tsr1. (811 aa)
T310_7016Sec2p domain-containing protein. (307 aa)
T310_7406rRNA processing protein (Ebp2). (396 aa)
T310_7044DNA directed RNA polymerase II 15 kDa subunit. (132 aa)
T310_7185zf-LYAR domain-containing protein. (617 aa)
T310_6749WD domain protein. (910 aa)
T310_6783Uncharacterized protein. (331 aa)
T310_6865SRP40_C domain-containing protein. (520 aa)
T310_6696Small nucleolar ribonucleoprotein complex subunit Utp14. (981 aa)
T310_6578RNA helicase; Belongs to the DEAD box helicase family. (603 aa)
T310_6752rRNA processing protein. (344 aa)
T310_6928Nucleic acid-binding protein. (368 aa)
T310_6535Nuclear protein (Sgd1). (853 aa)
T310_6511Uncharacterized protein. (1317 aa)
T310_6881Protein-tyrosine-phosphatase. (570 aa)
T310_6601Ribosome biogenesis protein (Bms1). (1841 aa)
T310_6419WD repeat protein. (716 aa)
T310_6507Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (608 aa)
T310_6484tRNA and rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (786 aa)
T310_6238H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (159 aa)
T310_6648ATP-dependent RNA helicase DBP10. (910 aa)
T310_6098RNA helicase. (652 aa)
T310_60743'-5' exoribonuclease. (265 aa)
T310_6655RNA helicase. (833 aa)
T310_6080Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (236 aa)
T310_5877Protein kinase domain-containing protein. (592 aa)
T310_5983Stc1 domain-containing protein. (447 aa)
T310_6455Urb2 domain-containing protein. (1511 aa)
T310_5801DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1695 aa)
T310_6153U3 small nucleolar ribonucleoprotein Mpp10. (813 aa)
T310_6354Uncharacterized protein. (416 aa)
T310_5984Uncharacterized protein. (654 aa)
T310_5696Nucleolar protein 9. (697 aa)
T310_5625Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (794 aa)
T310_5424RNA-binding protein required for biogenesis of the ribosomal 60S subunit. (139 aa)
T310_6001U3 small nucleolar RNA-associated protein 10. (1818 aa)
T310_5334Pre-rRNA-processing protein PNO1. (260 aa)
T310_5247Nucleolar protein 12. (560 aa)
T310_5886Small nucleolar ribonucleoprotein complex subunit (Pwp2). (908 aa)
T310_5180Uncharacterized protein. (843 aa)
T310_5177Exosome complex exonuclease exoribonuclease (Rrp44); Belongs to the RNR ribonuclease family. (1029 aa)
T310_5389Ribosomal small subunit assembly protein. (326 aa)
T310_4877Elp3 domain-containing protein. (413 aa)
T310_5338Carboxyl methylase. (279 aa)
T310_5514tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (482 aa)
T310_527320S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (428 aa)
T310_475940S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (215 aa)
T310_4888Hyoscyamine 6-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (358 aa)
T310_4631WD_REPEATS_REGION domain-containing protein. (637 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (444 aa)
T310_4808Exosome complex endonuclease 2/ribosomal RNA processing protein. (138 aa)
T310_463860S ribosome biogenesis protein Mak11. (485 aa)
T310_5213Nop14-like family protein. (922 aa)
T310_5183RNase_PH domain-containing protein. (394 aa)
T310_4746Topoisomerase family protein TRF4. (703 aa)
T310_4892DUF652 domain-containing protein. (207 aa)
T310_4939Exosome complex endonuclease 1. (254 aa)
T310_4406DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1140 aa)
T310_4311Small nucleolar ribonucleoprotein complex subunit. (1006 aa)
T310_4894WD repeat protein. (1047 aa)
T310_4635Small nucleolar ribonucleoprotein complex subunit. (1013 aa)
T310_4348Uncharacterized protein. (283 aa)
T310_4115Pseudouridylate synthase family protein. (490 aa)
T310_4402Uncharacterized protein. (257 aa)
T310_4412RNA helicase; Belongs to the DEAD box helicase family. (750 aa)
T310_4088Uncharacterized protein. (397 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (224 aa)
T310_4113DUF2431 domain-containing protein. (521 aa)
T310_4064HTH CENPB-type domain-containing protein. (268 aa)
T310_4079DNA-directed RNA polymerase. (498 aa)
T310_4288U6 snRNA-associated Sm-like protein LSm6. (136 aa)
T310_3986Polynucleotide 5'-hydroxyl-kinase grc3. (802 aa)
T310_3859Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (226 aa)
T310_3732Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (690 aa)
T310_3593Small nucleolar ribonucleoprotein complex subunit. (634 aa)
T310_4028Multifunctional fusion protein; Belongs to the peptidase S10 family. (1332 aa)
T310_3605rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (382 aa)
T310_3677WD repeat protein. (1010 aa)
T310_3630Ribosome associated DnaJ chaperone Zuotin. (445 aa)
T310_3866Chromosome segregation protein (Pcs1). (533 aa)
T310_373160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (190 aa)
T310_3321Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
T310_3331Uncharacterized protein. (705 aa)
T310_3238WD_REPEATS_REGION domain-containing protein. (491 aa)
T310_3327Uncharacterized protein. (411 aa)
T310_3073RRM domain-containing protein. (524 aa)
T310_3530Uncharacterized protein. (764 aa)
T310_3459Exosomal 3'-5' exoribonuclease complex. (384 aa)
T310_2969CVNH domain-containing protein. (194 aa)
T310_2813Pyruvate dehydrogenase (Acetyl-transferring). (391 aa)
T310_3527CCAAT-box-binding transcription factor. (1152 aa)
T310_2858DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1234 aa)
T310_3277Uncharacterized protein. (396 aa)
T310_2804Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (311 aa)
T310_2745RNA helicase. (770 aa)
T310_2692NIF domain protein. (577 aa)
T310_2702Urease. (307 aa)
T310_2836DNA-directed DNA polymerase. (1017 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (691 aa)
T310_3297RNA helicase. (615 aa)
T310_2748Ribosome assembly protein Noc2. (763 aa)
T310_3119Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (398 aa)
T310_2842HEAT repeat protein (DRIM). (2636 aa)
T310_2501Uncharacterized protein. (989 aa)
T310_2793Uncharacterized protein. (171 aa)
T310_2355Uncharacterized protein. (211 aa)
T310_2442Protein SIK1. (866 aa)
T310_2437Uncharacterized protein. (261 aa)
T310_2691rRNA biogenesis protein rrp36. (351 aa)
T310_2372RNA helicase. (643 aa)
T310_2382Nucleolar protein 58. (610 aa)
T310_2805Ribonuclease P. (312 aa)
T310_2786RNA-3'-phosphate cyclase family protein. (455 aa)
T310_2044Uncharacterized protein. (1071 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (796 aa)
T310_2534Uncharacterized protein. (400 aa)
T310_1967Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (325 aa)
T310_1954GTP binding protein. (562 aa)
T310_1804Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (779 aa)
T310_2136Ribosome biogenesis protein Noc4. (497 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. Belongs to the class I-like SAM-binding methyltransferase superfamily. DOT1 family. (1445 aa)
T310_1686DNA ligase. (1081 aa)
T310_2301Uncharacterized protein. (758 aa)
T310_2065ATP dependent RNA helicase (Dob1). (1079 aa)
T310_1769U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (292 aa)
T310_1560Uncharacterized protein. (366 aa)
T310_2020U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (715 aa)
T310_2030AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
T310_1735DNA-directed RNA polymerase. (235 aa)
T310_1775Uncharacterized protein. (324 aa)
T310_1301NOL1/NOP2/sun domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (538 aa)
T310_1880Rpp14 family. (215 aa)
T310_1699Uncharacterized protein. (583 aa)
T310_1900Uncharacterized protein. (711 aa)
T310_120960S ribosome biogenesis protein Rrp14. (544 aa)
T310_1800RNA helicase. (843 aa)
T310_1315RNA helicase; Belongs to the DEAD box helicase family. (399 aa)
T310_1542Uncharacterized protein. (183 aa)
T310_1269DNA-directed RNA polymerase. (374 aa)
T310_1447Uncharacterized protein. (213 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (432 aa)
T310_0874HMG box protein. (309 aa)
T310_0892Pre-rRNA processing protein Mrd1. (973 aa)
T310_158360S ribosomal subunit biogenesis protein Nop16. (246 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1212 aa)
T310_0947DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (879 aa)
T310_1449DNA-directed RNA polymerase. (140 aa)
T310_1180RNA processing protein Emg1. (307 aa)
T310_0687Uncharacterized protein; Belongs to the DEAD box helicase family. (1159 aa)
T310_0649rRNA processing protein Bystin. (516 aa)
T310_0845WD repeat-containing protein jip5. (410 aa)
T310_0617Uncharacterized protein. (439 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (201 aa)
T310_0493DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
T310_0293rRNA biogenesis protein RRP5. (1830 aa)
T310_0367Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (458 aa)
T310_0064Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (516 aa)
T310_0224Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1186 aa)
T310_0418Ribosome biogenesis protein NSA2. (258 aa)
T310_0586Cell cycle checkpoint protein (Hus1). (436 aa)
T310_0036Uncharacterized protein. (280 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
Server load: low (38%) [HD]