STRINGSTRING
T310_3619 T310_3619 T310_7096 T310_7096 T310_5913 T310_5913 T310_6211 T310_6211 T310_5627 T310_5627 T310_6187 T310_6187 T310_5249 T310_5249 T310_3570 T310_3570 T310_2537 T310_2537 T310_2212 T310_2212 T310_1869 T310_1869 T310_1458 T310_1458 T310_1333 T310_1333 T310_0903 T310_0903
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_3619Putative E3 ubiquitin ligase. (639 aa)
T310_7096WD repeat protein. (580 aa)
T310_5913WD domain, G-beta repeat containing protein. (441 aa)
T310_6211Uncharacterized protein. (907 aa)
T310_5627Uncharacterized protein. (280 aa)
T310_6187Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (588 aa)
T310_5249mRNA cleavage and polyadenylation specificity factor complex subunit (Pta1). (795 aa)
T310_3570Polyadenylation factor subunit CstF64. (249 aa)
T310_2537Cleavage and polyadenylation specificity factor subunit 2. (1011 aa)
T310_2212DUF455 domain protein. (1233 aa)
T310_1869Fip1 domain-containing protein. (341 aa)
T310_1458C-x8-C-x5-C-x3-H type zinc finger protein. (1292 aa)
T310_1333Uncharacterized protein. (268 aa)
T310_0903Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (309 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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