STRINGSTRING
T310_4079 T310_4079 T310_8406 T310_8406 T310_8417 T310_8417 T310_7618 T310_7618 T310_7323 T310_7323 T310_7044 T310_7044 T310_7159 T310_7159 T310_6527 T310_6527 T310_5877 T310_5877 T310_5721 T310_5721 T310_5374 T310_5374 T310_5379 T310_5379 T310_4465 T310_4465 T310_4191 T310_4191 T310_4130 T310_4130 T310_4017 T310_4017 T310_3910 T310_3910 T310_4136 T310_4136 T310_2858 T310_2858 T310_2531 T310_2531 T310_2758 T310_2758 T310_2128 T310_2128 T310_1552 T310_1552 T310_1490 T310_1490 T310_0877 T310_0877 T310_0923 T310_0923 T310_0596 T310_0596 T310_0043 T310_0043
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_4079DNA-directed RNA polymerase. (498 aa)
T310_8406Transcription elongation factor S-II. (296 aa)
T310_8417Transcription elongation factor SPT6. (1250 aa)
T310_7618RNA polymerase II transcription elongation factor (Ctr9). (1218 aa)
T310_7323Uncharacterized protein. (519 aa)
T310_7044DNA directed RNA polymerase II 15 kDa subunit. (132 aa)
T310_7159SPT6_acidic domain-containing protein. (284 aa)
T310_6527RNA polymerase II transcription elongation factor Rtf1p. (623 aa)
T310_5877Protein kinase domain-containing protein. (592 aa)
T310_5721Uncharacterized protein. (762 aa)
T310_5374Uncharacterized protein. (331 aa)
T310_5379RNA polymerase II transcription factor SIII (Elongin) subunit A. (411 aa)
T310_4465Histone chaperone rtt106. (467 aa)
T310_4191HLH DNA binding domain protein. (298 aa)
T310_4130Cyclin-dependent kinase. (544 aa)
T310_4017THO complex component (Rlr1). (2464 aa)
T310_3910THO complex subunit Tho1. (467 aa)
T310_4136Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (107 aa)
T310_2858DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1234 aa)
T310_2531Uncharacterized protein. (481 aa)
T310_2758Zn(2)-C6 fungal-type domain-containing protein. (1092 aa)
T310_2128Transcription initiation factor iif, beta subunit. (403 aa)
T310_1552Uncharacterized protein. (604 aa)
T310_1490RNA polymerase II accessory factor Cdc73p. (484 aa)
T310_0877PCI domain-containing protein. (459 aa)
T310_0923DNA-directed RNA polymerase. (160 aa)
T310_0596Uncharacterized protein. (610 aa)
T310_0043Uncharacterized protein. (336 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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