22 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_0833	Uncharacterized protein. (235 aa)
	T310_10024	DNA topoisomerase. (278 aa)
	T310_9351	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (119 aa)
	T310_8406	Transcription elongation factor S-II. (296 aa)
	T310_7858	Uncharacterized protein. (822 aa)
	T310_7571	RNA polymerase II transcription factor protein. (1002 aa)
	T310_7807	RNA polymerase I specific transcription initiation factor RRN3 superfamily. (694 aa)
	T310_7476	RNA polymerase I subunit Rpa43. (425 aa)
	T310_5801	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1695 aa)
	T310_4833	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (403 aa)
	T310_0367	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (458 aa)
	T310_4079	DNA-directed RNA polymerase. (498 aa)
	T310_3331	Uncharacterized protein. (705 aa)
	T310_2858	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1234 aa)
	T310_2406	Non-specific serine/threonine protein kinase. (1892 aa)
	T310_2501	Uncharacterized protein. (989 aa)
	T310_1735	DNA-directed RNA polymerase. (235 aa)
	T310_1269	DNA-directed RNA polymerase. (374 aa)
	T310_1449	DNA-directed RNA polymerase. (140 aa)
	T310_0617	Uncharacterized protein. (439 aa)
	T310_0923	DNA-directed RNA polymerase. (160 aa)
	T310_0679	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (130 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_0617	T310_0679	A0A0F4Z4A9	A0A0F4Z5B0	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.644
T310_0617	T310_0923	A0A0F4Z4A9	A0A0F4Z590	Uncharacterized protein.	DNA-directed RNA polymerase.	0.653
T310_0617	T310_10024	A0A0F4Z4A9	A0A0F4YEM1	Uncharacterized protein.	DNA topoisomerase.	0.444
T310_0617	T310_1269	A0A0F4Z4A9	A0A0F4Z306	Uncharacterized protein.	DNA-directed RNA polymerase.	0.679
T310_0617	T310_1449	A0A0F4Z4A9	A0A0F4Z3S4	Uncharacterized protein.	DNA-directed RNA polymerase.	0.761
T310_0617	T310_1735	A0A0F4Z4A9	A0A0F4Z293	Uncharacterized protein.	DNA-directed RNA polymerase.	0.679
T310_0617	T310_2501	A0A0F4Z4A9	A0A0F4YZA6	Uncharacterized protein.	Uncharacterized protein.	0.943
T310_0617	T310_2858	A0A0F4Z4A9	A0A0F4YXX9	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.799
T310_0617	T310_3331	A0A0F4Z4A9	A0A0F4YWQ8	Uncharacterized protein.	Uncharacterized protein.	0.538
T310_0617	T310_4079	A0A0F4Z4A9	A0A0F4YUY7	Uncharacterized protein.	DNA-directed RNA polymerase.	0.813
T310_0617	T310_5801	A0A0F4Z4A9	A0A0F4YPM7	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.803
T310_0617	T310_7476	A0A0F4Z4A9	A0A0F4YKA5	Uncharacterized protein.	RNA polymerase I subunit Rpa43.	0.701
T310_0617	T310_7807	A0A0F4Z4A9	A0A0F4YK57	Uncharacterized protein.	RNA polymerase I specific transcription initiation factor RRN3 superfamily.	0.822
T310_0617	T310_8406	A0A0F4Z4A9	A0A0F4YHB8	Uncharacterized protein.	Transcription elongation factor S-II.	0.421
T310_0617	T310_9351	A0A0F4Z4A9	A0A0F4YFT4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.770
T310_0679	T310_0617	A0A0F4Z5B0	A0A0F4Z4A9	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	Uncharacterized protein.	0.644
T310_0679	T310_0923	A0A0F4Z5B0	A0A0F4Z590	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase.	0.998
T310_0679	T310_1269	A0A0F4Z5B0	A0A0F4Z306	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase.	0.998
T310_0679	T310_1449	A0A0F4Z5B0	A0A0F4Z3S4	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase.	0.999
T310_0679	T310_1735	A0A0F4Z5B0	A0A0F4Z293	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase.	0.998