STRINGSTRING
T310_0177 T310_0177 T310_10159 T310_10159 T310_9814 T310_9814 T310_9812 T310_9812 T310_9817 T310_9817 T310_9842 T310_9842 T310_9710 T310_9710 T310_9604 T310_9604 T310_9630 T310_9630 T310_9616 T310_9616 T310_9711 T310_9711 T310_8406 T310_8406 T310_8417 T310_8417 T310_7571 T310_7571 T310_7618 T310_7618 T310_7323 T310_7323 T310_7391 T310_7391 T310_7044 T310_7044 T310_7054 T310_7054 T310_6932 T310_6932 T310_7159 T310_7159 T310_6778 T310_6778 T310_7146 T310_7146 T310_6731 T310_6731 T310_6734 T310_6734 T310_6527 T310_6527 T310_5877 T310_5877 T310_0043 T310_0043 T310_6211 T310_6211 T310_5513 T310_5513 T310_5187 T310_5187 T310_5800 T310_5800 T310_5721 T310_5721 T310_4968 T310_4968 T310_5542 T310_5542 T310_4900 T310_4900 T310_5374 T310_5374 T310_5379 T310_5379 T310_4833 T310_4833 T310_4848 T310_4848 T310_5161 T310_5161 T310_4465 T310_4465 T310_4504 T310_4504 T310_4403 T310_4403 T310_4605 T310_4605 T310_4556 T310_4556 T310_4939 T310_4939 T310_4927 T310_4927 T310_4372 T310_4372 T310_4191 T310_4191 T310_4130 T310_4130 T310_4388 T310_4388 T310_4493 T310_4493 T310_4017 T310_4017 T310_3910 T310_3910 T310_3776 T310_3776 T310_4136 T310_4136 T310_4082 T310_4082 T310_2948 T310_2948 T310_2687 T310_2687 T310_2531 T310_2531 T310_2781 T310_2781 T310_2758 T310_2758 T310_2078 T310_2078 T310_2017 T310_2017 T310_2032 T310_2032 T310_1723 T310_1723 T310_1753 T310_1753 T310_1771 T310_1771 T310_1779 T310_1779 T310_2128 T310_2128 T310_1531 T310_1531 T310_2077 T310_2077 T310_1735 T310_1735 T310_1339 T310_1339 T310_1785 T310_1785 T310_1186 T310_1186 T310_1552 T310_1552 T310_1490 T310_1490 T310_0874 T310_0874 T310_0877 T310_0877 T310_1165 T310_1165 T310_0637 T310_0637 T310_0249 T310_0249 T310_1072 T310_1072 T310_0417 T310_0417 T310_0923 T310_0923 T310_0679 T310_0679 T310_0227 T310_0227 T310_0596 T310_0596
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_0177Copper fist DNA binding domain protein. (416 aa)
T310_10159CCAAT-box-binding transcription factor (Eurofung). (253 aa)
T310_9814TAFII28 domain-containing protein. (405 aa)
T310_9812Transcription initiation factor TFIID complex 60 kDa subunit. (445 aa)
T310_9817Acyl_transf_3 domain-containing protein. (475 aa)
T310_9842TFIIH complex helicase Ssl2. (830 aa)
T310_9710Transcription initiation factor TFIID subunit 7. (489 aa)
T310_9604mRNA cleavage factor complex component Pcf11. (660 aa)
T310_9630Nucleolar RNAse III. (429 aa)
T310_9616MYB DNA-binding domain protein. (432 aa)
T310_9711BTP domain-containing protein. (215 aa)
T310_8406Transcription elongation factor S-II. (296 aa)
T310_8417Transcription elongation factor SPT6. (1250 aa)
T310_7571RNA polymerase II transcription factor protein. (1002 aa)
T310_7618RNA polymerase II transcription elongation factor (Ctr9). (1218 aa)
T310_7323Uncharacterized protein. (519 aa)
T310_7391Uncharacterized protein. (247 aa)
T310_7044DNA directed RNA polymerase II 15 kDa subunit. (132 aa)
T310_7054Transcription factor TFIIE complex alpha subunit. (412 aa)
T310_6932DNA-directed RNA polymerase. (217 aa)
T310_7159SPT6_acidic domain-containing protein. (284 aa)
T310_6778Polybromo-1. (689 aa)
T310_7146Acyl_transf_3 domain-containing protein. (426 aa)
T310_6731Transcription initiation protein. (260 aa)
T310_6734Transcription initiation protein. (183 aa)
T310_6527RNA polymerase II transcription elongation factor Rtf1p. (623 aa)
T310_5877Protein kinase domain-containing protein. (592 aa)
T310_0043Uncharacterized protein. (336 aa)
T310_6211Uncharacterized protein. (907 aa)
T310_5513RAI1 domain-containing protein. (216 aa)
T310_5187DNA-directed RNA polymerase. (339 aa)
T310_5800DNA repair helicase. (754 aa)
T310_5721Uncharacterized protein. (762 aa)
T310_4968Uncharacterized protein. (562 aa)
T310_5542DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1241 aa)
T310_4900Transcription initiation factor IIF. (720 aa)
T310_5374Uncharacterized protein. (331 aa)
T310_5379RNA polymerase II transcription factor SIII (Elongin) subunit A. (411 aa)
T310_4833Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (403 aa)
T310_4848DNA-directed RNA polymerase. (133 aa)
T310_5161DNA-directed RNA polymerase. (824 aa)
T310_4465Histone chaperone rtt106. (467 aa)
T310_4504Transcription factor TFIIH subunit Tfb4. (455 aa)
T310_4403Histone acetyltransferase. (1104 aa)
T310_4605General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (462 aa)
T310_4556Cyclin Ccl1. (436 aa)
T310_4939Exosome complex endonuclease 1. (254 aa)
T310_4927RNA polymerase I and III transcription factor complex component Tbp. (294 aa)
T310_4372Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (760 aa)
T310_4191HLH DNA binding domain protein. (298 aa)
T310_4130Cyclin-dependent kinase. (544 aa)
T310_4388SNF2 family helicase/ATPase. (1112 aa)
T310_4493TFIID and and SAGA complex TAF10 subunit. (326 aa)
T310_4017THO complex component (Rlr1). (2464 aa)
T310_3910THO complex subunit Tho1. (467 aa)
T310_3776RNA polymerase II C-terminal domain-binding protein RA4. (752 aa)
T310_4136Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (107 aa)
T310_4082DNA helicase. (2290 aa)
T310_2948Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (294 aa)
T310_2687Bromodomain associated domain protein. (358 aa)
T310_2531Uncharacterized protein. (481 aa)
T310_2781Uncharacterized protein. (1269 aa)
T310_2758Zn(2)-C6 fungal-type domain-containing protein. (1092 aa)
T310_2078SEN1_N domain-containing protein. (578 aa)
T310_2017Complex: TFIID is composed of TBP. (462 aa)
T310_2032Arginine/serine-rich splicing factor. (944 aa)
T310_1723SAGA-like transcriptional regulatory complex subunit Spt3. (361 aa)
T310_1753DUF1014 domain protein. (268 aa)
T310_1771Transcription initiation factor TFIID, 31kD subunit. (292 aa)
T310_1779DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1743 aa)
T310_2128Transcription initiation factor iif, beta subunit. (403 aa)
T310_1531RNA helicase (Dbp); Belongs to the DEAD box helicase family. (657 aa)
T310_2077tRNA-splicing endonuclease. (1484 aa)
T310_1735DNA-directed RNA polymerase. (235 aa)
T310_1339WD_REPEATS_REGION domain-containing protein. (788 aa)
T310_1785Transcription factor TFIIA complex subunit Toa1. (491 aa)
T310_1186Transcription factor Rba50. (481 aa)
T310_1552Uncharacterized protein. (604 aa)
T310_1490RNA polymerase II accessory factor Cdc73p. (484 aa)
T310_0874HMG box protein. (309 aa)
T310_0877PCI domain-containing protein. (459 aa)
T310_1165Transcription initiation factor TFIID subunit 12. (614 aa)
T310_0637CBF/NF-Y family transcription factor. (200 aa)
T310_0249AAA_12 domain-containing protein. (292 aa)
T310_1072DUF4211 domain-containing protein. (643 aa)
T310_0417C6 transcription factor (OTam). (715 aa)
T310_0923DNA-directed RNA polymerase. (160 aa)
T310_0679DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (130 aa)
T310_0227RSC complex subunit (RSC1). (918 aa)
T310_0596Uncharacterized protein. (610 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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