STRINGSTRING
T310_8373 T310_8373 T310_8909 T310_8909 T310_9099 T310_9099 T310_9475 T310_9475 T310_6072 T310_6072 T310_5513 T310_5513 T310_5424 T310_5424 YTM1 YTM1 T310_4773 T310_4773 T310_4340 T310_4340 T310_4153 T310_4153 T310_4120 T310_4120 T310_4542 T310_4542 TIF6 TIF6 T310_3859 T310_3859 T310_3966 T310_3966 T310_4047 T310_4047 T310_3731 T310_3731 T310_3209 T310_3209 T310_3837 T310_3837 T310_3327 T310_3327 NOP7 NOP7 T310_3297 T310_3297 T310_3210 T310_3210 T310_2748 T310_2748 T310_2937 T310_2937 T310_2372 T310_2372 ERB1 ERB1 T310_1954 T310_1954 T310_1804 T310_1804 SPB1 SPB1 T310_2030 T310_2030 T310_1209 T310_1209 T310_1800 T310_1800 T310_1447 T310_1447 T310_1006 T310_1006 T310_1393 T310_1393 T310_1583 T310_1583 T310_0687 T310_0687 T310_0845 T310_0845 T310_0916 T310_0916 T310_0361 T310_0361 T310_0322 T310_0322 T310_0390 T310_0390 T310_0349 T310_0349 T310_0579 T310_0579 T310_0087 T310_0087 T310_0204 T310_0204 T310_0418 T310_0418 T310_0293 T310_0293 T310_6484 T310_6484 T310_10242 T310_10242 T310_10223 T310_10223 T310_10027 T310_10027 T310_9986 T310_9986 T310_9468 T310_9468 T310_9483 T310_9483 T310_9494 T310_9494 T310_9357 T310_9357 T310_7930 T310_7930 T310_7891 T310_7891 T310_8202 T310_8202 T310_9098 T310_9098 T310_9550 T310_9550 T310_7507 T310_7507 T310_7555 T310_7555 T310_7406 T310_7406 T310_6080 T310_6080 T310_6547 T310_6547
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_8373Uncharacterized protein. (248 aa)
T310_8909F-box domain protein. (365 aa)
T310_9099Uncharacterized protein. (101 aa)
T310_947560S ribosomal protein L35. (136 aa)
T310_6072RNH70 is involved in DNA replication and RNA processing. (308 aa)
T310_5513RAI1 domain-containing protein. (216 aa)
T310_5424RNA-binding protein required for biogenesis of the ribosomal 60S subunit. (139 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (444 aa)
T310_477360S ribosomal protein L10. (224 aa)
T310_4340HIT finger domain protein. (192 aa)
T310_4153Uncharacterized protein. (321 aa)
T310_412060S ribosomal protein L23. (196 aa)
T310_4542WD_REPEATS_REGION domain-containing protein. (537 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (224 aa)
T310_3859Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (226 aa)
T310_3966AAA family ATPase. (1051 aa)
T310_4047Ribosome biogenesis GTPase Lsg1. (688 aa)
T310_373160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (190 aa)
T310_3209Uncharacterized protein. (366 aa)
T310_383760S ribosomal protein L7. (251 aa)
T310_3327Uncharacterized protein. (411 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (691 aa)
T310_3297RNA helicase. (615 aa)
T310_3210Uncharacterized protein. (400 aa)
T310_2748Ribosome assembly protein Noc2. (763 aa)
T310_2937Cytosolic large ribosomal subunit protein L7A. (413 aa)
T310_2372RNA helicase. (643 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (796 aa)
T310_1954GTP binding protein. (562 aa)
T310_1804Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (779 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. Belongs to the class I-like SAM-binding methyltransferase superfamily. DOT1 family. (1445 aa)
T310_2030AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
T310_120960S ribosome biogenesis protein Rrp14. (544 aa)
T310_1800RNA helicase. (843 aa)
T310_1447Uncharacterized protein. (213 aa)
T310_1006Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
T310_1393Ribosomal protein L14. (254 aa)
T310_158360S ribosomal subunit biogenesis protein Nop16. (246 aa)
T310_0687Uncharacterized protein; Belongs to the DEAD box helicase family. (1159 aa)
T310_0845WD repeat-containing protein jip5. (410 aa)
T310_091660S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
T310_0361Ribosome biogenesis (Nop4). (764 aa)
T310_0322HIT finger domain protein. (448 aa)
T310_039060S ribosomal protein L33. (109 aa)
T310_0349Ribosomal biogenesis protein Gar2. (444 aa)
T310_0579Protein MAK16; Belongs to the MAK16 family. (335 aa)
T310_0087Nucleolar GTP-binding protein 1. (1073 aa)
T310_0204Uncharacterized protein. (532 aa)
T310_0418Ribosome biogenesis protein NSA2. (258 aa)
T310_0293rRNA biogenesis protein RRP5. (1830 aa)
T310_6484tRNA and rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (786 aa)
T310_1024260S ribosomal protein L5. (300 aa)
T310_10223Ribosome biogenesis protein Urb1. (862 aa)
T310_10027Notchless-like WD40 repeat-containing protein. (515 aa)
T310_998660S ribosomal protein L6. (245 aa)
T310_9468RNA helicase; Belongs to the DEAD box helicase family. (501 aa)
T310_9483PUM-HD domain-containing protein. (715 aa)
T310_9494RNase L inhibitor of the ABC superfamily. (771 aa)
T310_9357Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (441 aa)
T310_7930Ribosome biogenesis protein RLP24. (191 aa)
T310_7891Ribosome biogenesis protein Ssf2. (363 aa)
T310_8202Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (238 aa)
T310_909860S ribosome biogenesis protein Brx1. (132 aa)
T310_9550Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4906 aa)
T310_7507RNA processing factor 1. (436 aa)
T310_7555Ribosome biogenesis protein. (335 aa)
T310_7406rRNA processing protein (Ebp2). (396 aa)
T310_6080Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (236 aa)
T310_654760S ribosomal protein L26-1. (116 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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