STRINGSTRING
T310_2900 T310_2900 T310_8070 T310_8070 T310_7782 T310_7782 T310_4786 T310_4786 T310_4406 T310_4406 T310_4267 T310_4267 T310_2683 T310_2683 T310_2057 T310_2057 T310_1367 T310_1367 T310_1050 T310_1050 T310_1711 T310_1711 T310_0780 T310_0780 T310_0656 T310_0656 T310_0491 T310_0491 T310_0209 T310_0209
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_2900Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (803 aa)
T310_8070L-serine dehydratase. (462 aa)
T310_7782Uncharacterized protein. (319 aa)
T310_4786Antigenic mitochondrial protein HSP60; Belongs to the chaperonin (HSP60) family. (1140 aa)
T310_4406DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1140 aa)
T310_4267Oxoglutarate dehydrogenase (Succinyl-transferring). (1045 aa)
T310_2683Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family. (398 aa)
T310_2057Acetolactate synthase. (336 aa)
T310_1367Phosphoglycerate mutase family protein. (200 aa)
T310_1050Pyruvate dehydrogenase E1 component alpha subunit. (750 aa)
T310_1711Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (401 aa)
T310_0780SsDNA binding protein. (113 aa)
T310_0656Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (243 aa)
T310_0491L-serine ammonia-lyase. (403 aa)
T310_0209Dihydrolipoyllysine-residue succinyltransferase. (472 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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