41 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_10107	WD_REPEATS_REGION domain-containing protein. (324 aa)
	T310_10025	C2H2 finger domain protein. (885 aa)
	T310_9686	Protein transport protein Sec61 alpha subunit. (478 aa)
	T310_8011	Ribosome recycling factor. (292 aa)
	T310_8305	Translational activator. (2301 aa)
	T310_7541	Translation factor SUI1. (143 aa)
	T310_7386	Translation elongation factor EF-2 subunit. (843 aa)
	T310_7540	Uncharacterized protein. (178 aa)
	T310_7014	Translation initiation factor 4B. (493 aa)
	T310_6673	SRP receptor beta subunit (Srp102). (320 aa)
	T310_6784	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (528 aa)
	T310_7250	Uncharacterized protein. (271 aa)
	T310_6681	MIT domain-containing protein. (1805 aa)
	T310_6507	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (608 aa)
	T310_6853	Regulatory protein SUAPRGA1. (311 aa)
	T310_6075	Ribosome biogenesis protein Ria1. (1091 aa)
	T310_6515	Eukaryotic translation initiation factor 5A. (159 aa)
	T310_5799	RING zinc finger protein. (1651 aa)
	T310_4770	DUF814 domain protein. (1177 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (444 aa)
	T310_4445	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (127 aa)
	T310_3983	Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (251 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (224 aa)
	T310_3967	Uncharacterized protein. (351 aa)
	T310_4368	Acetolactate synthase. (1045 aa)
	T310_3996	Regulatory factor Sgt1. (590 aa)
	T310_3630	Ribosome associated DnaJ chaperone Zuotin. (445 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (691 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (796 aa)
	T310_2581	Woronin body protein HexA. (561 aa)
	T310_1838	RNA splicing factor (Pad-1). (574 aa)
	T310_1962	RNA helicase. (1227 aa)
	T310_1751	GTP-binding protein Obg. (558 aa)
	T310_2345	Protein arginine methyltransferase RmtB; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (558 aa)
	T310_1619	Eukaryotic translation initiation factor 2 alpha subunit. (308 aa)
	GUF1	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (661 aa)
	T310_1391	SRP54 domain-containing protein. (668 aa)
	T310_2030	AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
	T310_1183	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (710 aa)
	T310_1706	Pre-rRNA processing protein. (341 aa)
	T310_0432	MRS7 family protein. (577 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	A0A0F4Z0A7	A0A0F4YYD5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	T310_1962	A0A0F4Z0A7	A0A0F4Z0T4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA helicase.	0.540
ERB1	T310_2030	A0A0F4Z0A7	A0A0F4Z240	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	AAA family ATPase/60S ribosome export protein Rix7.	0.838
ERB1	T310_4445	A0A0F4Z0A7	A0A0F4YT67	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.412
ERB1	T310_6784	A0A0F4Z0A7	A0A0F4YMC5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.	0.873
ERB1	TIF6	A0A0F4Z0A7	A0A0F4YUM7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.	0.969
ERB1	YTM1	A0A0F4Z0A7	A0A0F4YSS5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
GUF1	T310_1751	A0A0F4Z213	A0A0F4Z130	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	GTP-binding protein Obg.	0.442
GUF1	T310_8011	A0A0F4Z213	A0A0F4YII9	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Ribosome recycling factor.	0.507
NOP7	ERB1	A0A0F4YYD5	A0A0F4Z0A7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
NOP7	T310_1706	A0A0F4YYD5	A0A0F4Z323	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pre-rRNA processing protein.	0.596
NOP7	T310_1962	A0A0F4YYD5	A0A0F4Z0T4	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA helicase.	0.661
NOP7	T310_2030	A0A0F4YYD5	A0A0F4Z240	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	AAA family ATPase/60S ribosome export protein Rix7.	0.738
NOP7	T310_2345	A0A0F4YYD5	A0A0F4Z194	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein arginine methyltransferase RmtB; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.504
NOP7	T310_6784	A0A0F4YYD5	A0A0F4YMC5	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.	0.882
NOP7	T310_7014	A0A0F4YYD5	A0A0F4YLM0	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Translation initiation factor 4B.	0.427
NOP7	TIF6	A0A0F4YYD5	A0A0F4YUM7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.	0.971
NOP7	YTM1	A0A0F4YYD5	A0A0F4YSS5	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
T310_0432	T310_4368	A0A0F4Z4V7	A0A0F4YUQ0	MRS7 family protein.	Acetolactate synthase.	0.640
T310_10025	T310_4368	A0A0F4YDW8	A0A0F4YUQ0	C2H2 finger domain protein.	Acetolactate synthase.	0.632