STRINGSTRING
T310_10107 T310_10107 T310_10025 T310_10025 T310_9686 T310_9686 T310_8011 T310_8011 T310_8305 T310_8305 T310_7541 T310_7541 T310_7386 T310_7386 T310_7540 T310_7540 T310_7014 T310_7014 T310_6673 T310_6673 T310_6784 T310_6784 T310_7250 T310_7250 T310_6681 T310_6681 T310_6507 T310_6507 T310_6853 T310_6853 T310_6075 T310_6075 T310_6515 T310_6515 T310_5799 T310_5799 T310_4770 T310_4770 YTM1 YTM1 T310_4445 T310_4445 T310_3983 T310_3983 TIF6 TIF6 T310_3967 T310_3967 T310_4368 T310_4368 T310_3996 T310_3996 T310_3630 T310_3630 NOP7 NOP7 ERB1 ERB1 T310_2581 T310_2581 T310_1838 T310_1838 T310_1962 T310_1962 T310_1751 T310_1751 T310_2345 T310_2345 T310_1619 T310_1619 GUF1 GUF1 T310_1391 T310_1391 T310_2030 T310_2030 T310_1183 T310_1183 T310_1706 T310_1706 T310_0432 T310_0432
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_10107WD_REPEATS_REGION domain-containing protein. (324 aa)
T310_10025C2H2 finger domain protein. (885 aa)
T310_9686Protein transport protein Sec61 alpha subunit. (478 aa)
T310_8011Ribosome recycling factor. (292 aa)
T310_8305Translational activator. (2301 aa)
T310_7541Translation factor SUI1. (143 aa)
T310_7386Translation elongation factor EF-2 subunit. (843 aa)
T310_7540Uncharacterized protein. (178 aa)
T310_7014Translation initiation factor 4B. (493 aa)
T310_6673SRP receptor beta subunit (Srp102). (320 aa)
T310_678460S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (528 aa)
T310_7250Uncharacterized protein. (271 aa)
T310_6681MIT domain-containing protein. (1805 aa)
T310_6507Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (608 aa)
T310_6853Regulatory protein SUAPRGA1. (311 aa)
T310_6075Ribosome biogenesis protein Ria1. (1091 aa)
T310_6515Eukaryotic translation initiation factor 5A. (159 aa)
T310_5799RING zinc finger protein. (1651 aa)
T310_4770DUF814 domain protein. (1177 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (444 aa)
T310_444560S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (127 aa)
T310_3983Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (251 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (224 aa)
T310_3967Uncharacterized protein. (351 aa)
T310_4368Acetolactate synthase. (1045 aa)
T310_3996Regulatory factor Sgt1. (590 aa)
T310_3630Ribosome associated DnaJ chaperone Zuotin. (445 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (691 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (796 aa)
T310_2581Woronin body protein HexA. (561 aa)
T310_1838RNA splicing factor (Pad-1). (574 aa)
T310_1962RNA helicase. (1227 aa)
T310_1751GTP-binding protein Obg. (558 aa)
T310_2345Protein arginine methyltransferase RmtB; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (558 aa)
T310_1619Eukaryotic translation initiation factor 2 alpha subunit. (308 aa)
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (661 aa)
T310_1391SRP54 domain-containing protein. (668 aa)
T310_2030AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
T310_1183Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (710 aa)
T310_1706Pre-rRNA processing protein. (341 aa)
T310_0432MRS7 family protein. (577 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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