24 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_1341	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (268 aa)
	T310_8833	Cytokinesis protein sepA. (410 aa)
	T310_9534	Glucan endo-1,3-alpha-glucosidase agn1. (438 aa)
	T310_9381	Myosin ATPase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1267 aa)
	T310_8527	Non-specific serine/threonine protein kinase. (835 aa)
	T310_8824	Cytokinesis protein sepA. (696 aa)
	T310_8454	BAR adaptor protein RVS167. (424 aa)
	T310_7083	Serine/threonine protein kinase. (623 aa)
	T310_7621	Non-specific serine/threonine protein kinase. (827 aa)
	T310_6995	Actin-interacting protein (Bud6/Aip3). (1045 aa)
	T310_6805	Phosphoprotein phosphatase. (658 aa)
	T310_5453	Plasma membrane fusion protein PRM1; Involved in cell fusion during mating by stabilizing the plasma membrane fusion event; Belongs to the PRM1 family. (748 aa)
	T310_4999	Uncharacterized protein. (609 aa)
	T310_5124	Exo-beta-1,3-glucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (424 aa)
	T310_4316	Alpha-1,3-glucanase/mutanase. (506 aa)
	T310_4248	Rho guanyl nucleotide exchange factor. (1253 aa)
	T310_3977	LIM domain protein. (767 aa)
	T310_4404	Serine/threonine protein kinase cbk1. (951 aa)
	T310_3797	Coronin; Belongs to the WD repeat coronin family. (591 aa)
	T310_3878	Protein kinase activator Bem1. (631 aa)
	T310_3432	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1667 aa)
	T310_3439	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (456 aa)
	T310_2344	Conidiophore development protein HymA. (448 aa)
	T310_1051	Von Willebrand and RING finger domain protein. (915 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_1051	T310_3878	A0A0F4Z3J0	A0A0F4YW77	Von Willebrand and RING finger domain protein.	Protein kinase activator Bem1.	0.838
T310_1051	T310_4248	A0A0F4Z3J0	A0A0F4YTY0	Von Willebrand and RING finger domain protein.	Rho guanyl nucleotide exchange factor.	0.949
T310_1051	T310_6805	A0A0F4Z3J0	A0A0F4YMA9	Von Willebrand and RING finger domain protein.	Phosphoprotein phosphatase.	0.611
T310_1051	T310_7621	A0A0F4Z3J0	A0A0F4YLF1	Von Willebrand and RING finger domain protein.	Non-specific serine/threonine protein kinase.	0.566
T310_1051	T310_8527	A0A0F4Z3J0	A0A0F4YI45	Von Willebrand and RING finger domain protein.	Non-specific serine/threonine protein kinase.	0.566
T310_1341	T310_3797	A0A0F4Z3J7	A0A0F4YVQ1	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Coronin; Belongs to the WD repeat coronin family.	0.572
T310_1341	T310_7621	A0A0F4Z3J7	A0A0F4YLF1	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Non-specific serine/threonine protein kinase.	0.625
T310_1341	T310_8527	A0A0F4Z3J7	A0A0F4YI45	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Non-specific serine/threonine protein kinase.	0.625
T310_2344	T310_4404	A0A0F4YZD7	A0A0F4YV64	Conidiophore development protein HymA.	Serine/threonine protein kinase cbk1.	0.575
T310_2344	T310_7083	A0A0F4YZD7	A0A0F4YL63	Conidiophore development protein HymA.	Serine/threonine protein kinase.	0.672
T310_3797	T310_1341	A0A0F4YVQ1	A0A0F4Z3J7	Coronin; Belongs to the WD repeat coronin family.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.572
T310_3797	T310_6995	A0A0F4YVQ1	A0A0F4YLP4	Coronin; Belongs to the WD repeat coronin family.	Actin-interacting protein (Bud6/Aip3).	0.435
T310_3797	T310_9381	A0A0F4YVQ1	A0A0F4YHA0	Coronin; Belongs to the WD repeat coronin family.	Myosin ATPase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.572
T310_3878	T310_1051	A0A0F4YW77	A0A0F4Z3J0	Protein kinase activator Bem1.	Von Willebrand and RING finger domain protein.	0.838
T310_3878	T310_4248	A0A0F4YW77	A0A0F4YTY0	Protein kinase activator Bem1.	Rho guanyl nucleotide exchange factor.	0.998
T310_3878	T310_6995	A0A0F4YW77	A0A0F4YLP4	Protein kinase activator Bem1.	Actin-interacting protein (Bud6/Aip3).	0.425
T310_3878	T310_7621	A0A0F4YW77	A0A0F4YLF1	Protein kinase activator Bem1.	Non-specific serine/threonine protein kinase.	0.976
T310_3878	T310_8527	A0A0F4YW77	A0A0F4YI45	Protein kinase activator Bem1.	Non-specific serine/threonine protein kinase.	0.977
T310_3878	T310_8824	A0A0F4YW77	A0A0F4YID1	Protein kinase activator Bem1.	Cytokinesis protein sepA.	0.559
T310_3878	T310_8833	A0A0F4YW77	A0A0F4YGN2	Protein kinase activator Bem1.	Cytokinesis protein sepA.	0.559