STRINGSTRING
T310_4833 T310_4833 T310_4556 T310_4556 T310_4130 T310_4130 T310_3913 T310_3913 T310_5877 T310_5877 T310_7571 T310_7571 T310_5800 T310_5800 T310_4504 T310_4504
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_4833Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (403 aa)
T310_4556Cyclin Ccl1. (436 aa)
T310_4130Cyclin-dependent kinase. (544 aa)
T310_3913RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (433 aa)
T310_5877Protein kinase domain-containing protein. (592 aa)
T310_7571RNA polymerase II transcription factor protein. (1002 aa)
T310_5800DNA repair helicase. (754 aa)
T310_4504Transcription factor TFIIH subunit Tfb4. (455 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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