35 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_3604	mRNA splicing factor (Prp1/Zer1). (980 aa)
	T310_9629	Splicing factor 3b, subunit 2. (558 aa)
	T310_9511	Cell cycle control protein (Cwf4). (775 aa)
	T310_9257	Pre-mRNA splicing factor. (686 aa)
	T310_8858	MI domain-containing protein. (790 aa)
	T310_8263	mRNA splicing factor RNA helicase (Prp16). (920 aa)
	T310_7844	MPN domain-containing protein. (2332 aa)
	T310_8367	mRNA splicing factor (Prp17). (582 aa)
	T310_8015	U5 snRNP component Snu114. (988 aa)
	T310_7296	Cell cycle control protein (Cwf2). (426 aa)
	T310_7314	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (160 aa)
	T310_7884	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	T310_7847	Cactin. (545 aa)
	T310_7082	Splicing factor 3a subunit 2. (235 aa)
	T310_5607	Peptidylprolyl isomerase. (576 aa)
	T310_5541	Uncharacterized protein. (276 aa)
	T310_5884	WD repeat protein. (325 aa)
	T310_5397	U5 snRNP complex subunit. (358 aa)
	T310_5197	Peptidyl prolyl cis-trans isomerase Cyclophilin. (153 aa)
	T310_5437	mRNA splicing protein Yju2. (272 aa)
	T310_4858	Nuclear protein SDK3. (330 aa)
	T310_4807	Uncharacterized protein. (253 aa)
	T310_4208	Peptidylprolyl isomerase. (604 aa)
	T310_4348	Uncharacterized protein. (283 aa)
	T310_4299	Sm domain-containing protein. (230 aa)
	T310_3632	Pre-RNA splicing factor Slt11. (371 aa)
	T310_3911	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1467 aa)
	T310_3532	mRNA splicing protein (Prp5). (451 aa)
	T310_3200	Small nuclear ribonucleoprotein Sm D2. (176 aa)
	T310_2125	Uncharacterized protein. (379 aa)
	T310_1894	Peptidyl-prolyl cis-trans isomerase-like 3. (135 aa)
	T310_0965	Splicing factor 3B subunit 1. (1230 aa)
	T310_0668	DNA repair and transcription protein (Xab2). (822 aa)
	T310_1223	BCAS2 family protein. (219 aa)
	T310_1059	SYF2 splicing factor domain protein. (400 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_0668	T310_0965	A0A0F4Z443	A0A0F4Z375	DNA repair and transcription protein (Xab2).	Splicing factor 3B subunit 1.	0.941
T310_0668	T310_1059	A0A0F4Z443	A0A0F4Z4W0	DNA repair and transcription protein (Xab2).	SYF2 splicing factor domain protein.	0.998
T310_0668	T310_1223	A0A0F4Z443	A0A0F4Z4G2	DNA repair and transcription protein (Xab2).	BCAS2 family protein.	0.955
T310_0668	T310_1894	A0A0F4Z443	A0A0F4Z0M7	DNA repair and transcription protein (Xab2).	Peptidyl-prolyl cis-trans isomerase-like 3.	0.784
T310_0668	T310_3200	A0A0F4Z443	A0A0F4YYP6	DNA repair and transcription protein (Xab2).	Small nuclear ribonucleoprotein Sm D2.	0.937
T310_0668	T310_3532	A0A0F4Z443	A0A0F4YXU6	DNA repair and transcription protein (Xab2).	mRNA splicing protein (Prp5).	0.987
T310_0668	T310_3604	A0A0F4Z443	A0A0F4YXQ4	DNA repair and transcription protein (Xab2).	mRNA splicing factor (Prp1/Zer1).	0.720
T310_0668	T310_3632	A0A0F4Z443	A0A0F4YVI3	DNA repair and transcription protein (Xab2).	Pre-RNA splicing factor Slt11.	0.997
T310_0668	T310_3911	A0A0F4Z443	A0A0F4YVZ6	DNA repair and transcription protein (Xab2).	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.997
T310_0668	T310_4208	A0A0F4Z443	A0A0F4YU50	DNA repair and transcription protein (Xab2).	Peptidylprolyl isomerase.	0.702
T310_0668	T310_4299	A0A0F4Z443	A0A0F4YUA0	DNA repair and transcription protein (Xab2).	Sm domain-containing protein.	0.951
T310_0668	T310_4348	A0A0F4Z443	A0A0F4YU62	DNA repair and transcription protein (Xab2).	Uncharacterized protein.	0.653
T310_0668	T310_4807	A0A0F4Z443	A0A0F4YSF0	DNA repair and transcription protein (Xab2).	Uncharacterized protein.	0.953
T310_0668	T310_5197	A0A0F4Z443	A0A0F4YR76	DNA repair and transcription protein (Xab2).	Peptidyl prolyl cis-trans isomerase Cyclophilin.	0.997
T310_0668	T310_5397	A0A0F4Z443	A0A0F4YQQ3	DNA repair and transcription protein (Xab2).	U5 snRNP complex subunit.	0.884
T310_0668	T310_5437	A0A0F4Z443	A0A0F4YRR0	DNA repair and transcription protein (Xab2).	mRNA splicing protein Yju2.	0.987
T310_0668	T310_5541	A0A0F4Z443	A0A0F4YQ63	DNA repair and transcription protein (Xab2).	Uncharacterized protein.	0.867
T310_0668	T310_5607	A0A0F4Z443	A0A0F4YPZ4	DNA repair and transcription protein (Xab2).	Peptidylprolyl isomerase.	0.951
T310_0668	T310_5884	A0A0F4Z443	A0A0F4YQI8	DNA repair and transcription protein (Xab2).	WD repeat protein.	0.418
T310_0668	T310_7082	A0A0F4Z443	A0A0F4YMV4	DNA repair and transcription protein (Xab2).	Splicing factor 3a subunit 2.	0.942