30 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_6378	Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. (202 aa)
	T310_10193	Glutaredoxin domain-containing protein. (379 aa)
	T310_9455	SH3 domain protein. (227 aa)
	T310_8833	Cytokinesis protein sepA. (410 aa)
	T310_8470	Actin associated protein Wsp1. (401 aa)
	T310_9381	Myosin ATPase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1267 aa)
	T310_8350	WH2 domain-containing protein. (119 aa)
	T310_8543	Cytokinesis protein SepA/Bni1. (707 aa)
	T310_8824	Cytokinesis protein sepA. (696 aa)
	T310_8393	Uncharacterized protein. (327 aa)
	T310_7401	Uncharacterized protein. (465 aa)
	T310_6995	Actin-interacting protein (Bud6/Aip3). (1045 aa)
	T310_6748	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (340 aa)
	T310_5612	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (199 aa)
	T310_5362	GMF family protein. (141 aa)
	T310_5325	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (357 aa)
	T310_4339	Ras guanyl-nucleotide exchange factor RasGEF. (928 aa)
	T310_3797	Coronin; Belongs to the WD repeat coronin family. (591 aa)
	T310_3670	Profilin; Belongs to the profilin family. (131 aa)
	T310_3359	RRN9 domain-containing protein. (688 aa)
	T310_3602	Uncharacterized protein. (1871 aa)
	T310_2654	Adenylyl cyclase-associated protein; Belongs to the CAP family. (528 aa)
	T310_1797	Gelsolin repeat protein. (1631 aa)
	T310_1436	PH domain-containing protein. (1308 aa)
	T310_1085	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (177 aa)
	T310_1008	WH2 domain-containing protein. (458 aa)
	T310_1341	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (268 aa)
	T310_0731	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (1017 aa)
	T310_1084	Uncharacterized protein. (801 aa)
	T310_0280	Actin binding protein. (810 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_0280	T310_1008	A0A0F4Z5C0	A0A0F4Z365	Actin binding protein.	WH2 domain-containing protein.	0.520
T310_0280	T310_1341	A0A0F4Z5C0	A0A0F4Z3J7	Actin binding protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.836
T310_0280	T310_1797	A0A0F4Z5C0	A0A0F4Z1C1	Actin binding protein.	Gelsolin repeat protein.	0.490
T310_0280	T310_2654	A0A0F4Z5C0	A0A0F4YYY3	Actin binding protein.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.963
T310_0280	T310_3602	A0A0F4Z5C0	A0A0F4YX16	Actin binding protein.	Uncharacterized protein.	0.448
T310_0280	T310_3670	A0A0F4Z5C0	A0A0F4YW76	Actin binding protein.	Profilin; Belongs to the profilin family.	0.512
T310_0280	T310_3797	A0A0F4Z5C0	A0A0F4YVQ1	Actin binding protein.	Coronin; Belongs to the WD repeat coronin family.	0.534
T310_0280	T310_5362	A0A0F4Z5C0	A0A0F4YSP2	Actin binding protein.	GMF family protein.	0.477
T310_0280	T310_5612	A0A0F4Z5C0	A0A0F4YPZ9	Actin binding protein.	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.419
T310_0280	T310_6378	A0A0F4Z5C0	A0A0F4YN01	Actin binding protein.	Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.	0.543
T310_0280	T310_6748	A0A0F4Z5C0	A0A0F4YN69	Actin binding protein.	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.590
T310_0280	T310_8350	A0A0F4Z5C0	A0A0F4YHY2	Actin binding protein.	WH2 domain-containing protein.	0.680
T310_0280	T310_8470	A0A0F4Z5C0	A0A0F4YH57	Actin binding protein.	Actin associated protein Wsp1.	0.591
T310_0280	T310_9381	A0A0F4Z5C0	A0A0F4YHA0	Actin binding protein.	Myosin ATPase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.671
T310_0731	T310_1341	A0A0F4Z4I7	A0A0F4Z3J7	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.990
T310_0731	T310_1436	A0A0F4Z4I7	A0A0F4Z2D8	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	PH domain-containing protein.	0.806
T310_0731	T310_3602	A0A0F4Z4I7	A0A0F4YX16	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.577
T310_0731	T310_5612	A0A0F4Z4I7	A0A0F4YPZ9	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.457
T310_0731	T310_6748	A0A0F4Z4I7	A0A0F4YN69	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.430
T310_1008	T310_0280	A0A0F4Z365	A0A0F4Z5C0	WH2 domain-containing protein.	Actin binding protein.	0.520