STRINGSTRING
T310_1301 T310_1301 T310_10123 T310_10123 T310_10024 T310_10024 T310_9798 T310_9798 T310_10121 T310_10121 T310_9468 T310_9468 T310_9483 T310_9483 T310_9635 T310_9635 T310_9346 T310_9346 T310_8984 T310_8984 T310_9099 T310_9099 T310_9608 T310_9608 T310_8988 T310_8988 T310_9098 T310_9098 T310_8169 T310_8169 T310_8202 T310_8202 T310_8113 T310_8113 T310_7891 T310_7891 T310_7810 T310_7810 T310_7792 T310_7792 T310_7874 T310_7874 T310_8399 T310_8399 T310_7987 T310_7987 T310_7533 T310_7533 T310_7478 T310_7478 T310_7807 T310_7807 T310_7392 T310_7392 T310_7995 T310_7995 T310_7613 T310_7613 T310_7341 T310_7341 T310_7089 T310_7089 T310_6749 T310_6749 T310_6865 T310_6865 T310_6578 T310_6578 T310_6514 T310_6514 T310_6928 T310_6928 T310_6535 T310_6535 T310_6881 T310_6881 T310_6238 T310_6238 T310_6648 T310_6648 T310_6201 T310_6201 T310_6098 T310_6098 T310_6080 T310_6080 T310_6455 T310_6455 T310_6153 T310_6153 T310_6250 T310_6250 T310_5424 T310_5424 T310_6001 T310_6001 T310_5247 T310_5247 T310_5886 T310_5886 T310_5767 T310_5767 T310_5484 T310_5484 T310_5389 T310_5389 T310_5338 T310_5338 T310_5514 T310_5514 T310_5056 T310_5056 T310_4638 T310_4638 T310_4676 T310_4676 T310_4405 T310_4405 T310_4311 T310_4311 T310_4894 T310_4894 T310_4153 T310_4153 T310_4115 T310_4115 T310_4033 T310_4033 T310_4412 T310_4412 T310_4088 T310_4088 TIF6 TIF6 T310_4113 T310_4113 T310_3593 T310_3593 T310_3575 T310_3575 T310_3457 T310_3457 T310_3731 T310_3731 T310_3321 T310_3321 T310_3331 T310_3331 T310_3073 T310_3073 T310_3253 T310_3253 T310_3240 T310_3240 T310_2720 T310_2720 T310_3389 T310_3389 T310_2745 T310_2745 T310_3297 T310_3297 T310_1880 T310_1880 T310_2372 T310_2372 T310_2382 T310_2382 T310_2805 T310_2805 T310_2786 T310_2786 T310_2534 T310_2534 T310_1954 T310_1954 T310_2301 T310_2301 T310_2020 T310_2020 T310_1372 T310_1372 T310_2030 T310_2030 T310_1775 T310_1775 T310_10223 T310_10223 T310_0367 T310_0367 T310_0064 T310_0064 T310_0616 T310_0616 T310_0739 T310_0739 T310_0325 T310_0325 T310_0547 T310_0547 T310_0755 T310_0755 T310_0579 T310_0579 T310_0349 T310_0349 T310_0833 T310_0833 T310_0212 T310_0212 T310_0270 T310_0270 T310_0679 T310_0679 T310_0923 T310_0923 T310_0366 T310_0366 T310_0361 T310_0361 T310_0757 T310_0757 T310_0617 T310_0617 T310_0687 T310_0687 T310_1449 T310_1449 T310_1544 T310_1544 T310_0874 T310_0874 T310_1447 T310_1447 T310_1190 T310_1190 T310_1269 T310_1269 T310_1209 T310_1209 T310_1699 T310_1699 T310_2501 T310_2501 T310_2793 T310_2793 T310_2355 T310_2355 T310_2442 T310_2442 T310_2437 T310_2437
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_1301NOL1/NOP2/sun domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (538 aa)
T310_10123Uncharacterized protein. (300 aa)
T310_10024DNA topoisomerase. (278 aa)
T310_9798Periodic tryptophan protein. (231 aa)
T310_10121Uncharacterized protein. (192 aa)
T310_9468RNA helicase; Belongs to the DEAD box helicase family. (501 aa)
T310_9483PUM-HD domain-containing protein. (715 aa)
T310_9635Protein pxr1. (294 aa)
T310_9346Pre-rRNA processing protein Esf1. (726 aa)
T310_8984Nucleolin protein Nsr1. (145 aa)
T310_9099Uncharacterized protein. (101 aa)
T310_9608Uncharacterized protein. (246 aa)
T310_8988Uncharacterized protein. (221 aa)
T310_909860S ribosome biogenesis protein Brx1. (132 aa)
T310_8169Small nucleolar ribonucleoprotein complex component (Utp5). (863 aa)
T310_8202Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (238 aa)
T310_8113RNA binding protein. (305 aa)
T310_7891Ribosome biogenesis protein Ssf2. (363 aa)
T310_7810rRNA processing protein Pwp1. (554 aa)
T310_7792Fibrillarin. (683 aa)
T310_7874DEAD/DEAH box helicase. (907 aa)
T310_8399Non-specific serine/threonine protein kinase. (549 aa)
T310_7987DNA-directed DNA polymerase. (600 aa)
T310_7533U3 small nucleolar ribonucleoprotein IMP4. (411 aa)
T310_7478Uncharacterized protein. (1280 aa)
T310_7807RNA polymerase I specific transcription initiation factor RRN3 superfamily. (694 aa)
T310_7392Ribosomal protein of the small subunit rps28; Belongs to the universal ribosomal protein uS12 family. (145 aa)
T310_7995Ribonucleases P/MRP protein subunit. (1210 aa)
T310_7613Uncharacterized protein. (310 aa)
T310_7341Small nucleolar ribonucleoprotein complex subunit Utp15. (542 aa)
T310_7089ToxD protein. (541 aa)
T310_6749WD domain protein. (910 aa)
T310_6865SRP40_C domain-containing protein. (520 aa)
T310_6578RNA helicase; Belongs to the DEAD box helicase family. (603 aa)
T310_6514Ubiquitin-like domain-containing protein. (747 aa)
T310_6928Nucleic acid-binding protein. (368 aa)
T310_6535Nuclear protein (Sgd1). (853 aa)
T310_6881Protein-tyrosine-phosphatase. (570 aa)
T310_6238H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (159 aa)
T310_6648ATP-dependent RNA helicase DBP10. (910 aa)
T310_6201C6 transcription factor. (697 aa)
T310_6098RNA helicase. (652 aa)
T310_6080Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (236 aa)
T310_6455Urb2 domain-containing protein. (1511 aa)
T310_6153U3 small nucleolar ribonucleoprotein Mpp10. (813 aa)
T310_6250DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1660 aa)
T310_5424RNA-binding protein required for biogenesis of the ribosomal 60S subunit. (139 aa)
T310_6001U3 small nucleolar RNA-associated protein 10. (1818 aa)
T310_5247Nucleolar protein 12. (560 aa)
T310_5886Small nucleolar ribonucleoprotein complex subunit (Pwp2). (908 aa)
T310_5767WD_REPEATS_REGION domain-containing protein. (329 aa)
T310_5484RING finger domain protein (Rnf10). (743 aa)
T310_5389Ribosomal small subunit assembly protein. (326 aa)
T310_5338Carboxyl methylase. (279 aa)
T310_5514tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (482 aa)
T310_5056Cellular morphogenesis protein (Bud22). (459 aa)
T310_463860S ribosome biogenesis protein Mak11. (485 aa)
T310_4676Catalytic protein. (1437 aa)
T310_4405FK506-binding protein. (482 aa)
T310_4311Small nucleolar ribonucleoprotein complex subunit. (1006 aa)
T310_4894WD repeat protein. (1047 aa)
T310_4153Uncharacterized protein. (321 aa)
T310_4115Pseudouridylate synthase family protein. (490 aa)
T310_4033Uncharacterized protein. (221 aa)
T310_4412RNA helicase; Belongs to the DEAD box helicase family. (750 aa)
T310_4088Uncharacterized protein. (397 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (224 aa)
T310_4113DUF2431 domain-containing protein. (521 aa)
T310_3593Small nucleolar ribonucleoprotein complex subunit. (634 aa)
T310_3575DNA helicase; Belongs to the MCM family. (1167 aa)
T310_3457NB-ARC domain-containing protein. (637 aa)
T310_373160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (190 aa)
T310_3321Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
T310_3331Uncharacterized protein. (705 aa)
T310_3073RRM domain-containing protein. (524 aa)
T310_3253Uncharacterized protein. (168 aa)
T310_3240Uncharacterized protein. (939 aa)
T310_2720WD_REPEATS_REGION domain-containing protein. (1655 aa)
T310_3389F-box domain protein. (1037 aa)
T310_2745RNA helicase. (770 aa)
T310_3297RNA helicase. (615 aa)
T310_1880Rpp14 family. (215 aa)
T310_2372RNA helicase. (643 aa)
T310_2382Nucleolar protein 58. (610 aa)
T310_2805Ribonuclease P. (312 aa)
T310_2786RNA-3'-phosphate cyclase family protein. (455 aa)
T310_2534Uncharacterized protein. (400 aa)
T310_1954GTP binding protein. (562 aa)
T310_2301Uncharacterized protein. (758 aa)
T310_2020U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (715 aa)
T310_1372HAD_SAK_1 domain-containing protein. (574 aa)
T310_2030AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
T310_1775Uncharacterized protein. (324 aa)
T310_10223Ribosome biogenesis protein Urb1. (862 aa)
T310_0367Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (458 aa)
T310_0064Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (516 aa)
T310_0616ECM11 domain-containing protein. (474 aa)
T310_0739Importin beta-4 subunit. (1089 aa)
T310_0325Protease. (998 aa)
T310_0547Uncharacterized protein. (221 aa)
T310_0755ATP-dependent RNA helicase (Hrh1). (805 aa)
T310_0579Protein MAK16; Belongs to the MAK16 family. (335 aa)
T310_0349Ribosomal biogenesis protein Gar2. (444 aa)
T310_0833Uncharacterized protein. (235 aa)
T310_0212U3 small nucleolar RNA-associated protein 22. (1129 aa)
T310_0270rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (106 aa)
T310_0679DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (130 aa)
T310_0923DNA-directed RNA polymerase. (160 aa)
T310_0366Fungal specific transcription factor. (776 aa)
T310_0361Ribosome biogenesis (Nop4). (764 aa)
T310_0757DUF676 domain-containing protein. (502 aa)
T310_0617Uncharacterized protein. (439 aa)
T310_0687Uncharacterized protein; Belongs to the DEAD box helicase family. (1159 aa)
T310_1449DNA-directed RNA polymerase. (140 aa)
T310_1544Serine/threonine-protein kinase RIO1. (192 aa)
T310_0874HMG box protein. (309 aa)
T310_1447Uncharacterized protein. (213 aa)
T310_1190Importin beta-3 subunit. (1095 aa)
T310_1269DNA-directed RNA polymerase. (374 aa)
T310_120960S ribosome biogenesis protein Rrp14. (544 aa)
T310_1699Uncharacterized protein. (583 aa)
T310_2501Uncharacterized protein. (989 aa)
T310_2793Uncharacterized protein. (171 aa)
T310_2355Uncharacterized protein. (211 aa)
T310_2442Protein SIK1. (866 aa)
T310_2437Uncharacterized protein. (261 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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