39 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_10256	Actin cytoskeleton-regulatory complex protein end3. (405 aa)
	T310_10248	Uncharacterized protein. (755 aa)
	T310_9634	Phosphoinositide 5-phosphatase. (1186 aa)
	T310_10105	Alpha-actinin, sarcomeric (F-actin cross linking protein). (648 aa)
	T310_9435	Ras GTPase activating protein. (1749 aa)
	T310_9437	Cell polarity protein. (894 aa)
	T310_9381	Myosin ATPase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1267 aa)
	T310_7914	Uncharacterized protein. (427 aa)
	T310_7822	Uncharacterized protein. (935 aa)
	T310_7490	Actin polymerization protein Bzz1. (726 aa)
	T310_7537	Uncharacterized protein. (634 aa)
	T310_7271	Non-specific serine/threonine protein kinase. (637 aa)
	T310_7337	Conserved serine proline-rich protein. (1005 aa)
	T310_6466	Vacuolar ATP synthase catalytic subunit A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1496 aa)
	T310_6462	Uncharacterized protein. (853 aa)
	T310_6403	SH3 domain protein (Cyk3). (1162 aa)
	T310_4913	Cell division control protein (Cdc15). (943 aa)
	T310_5362	GMF family protein. (141 aa)
	T310_5325	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (357 aa)
	T310_5176	LIM domain protein. (779 aa)
	T310_4571	Ubiquitination network signaling protein. (1167 aa)
	T310_4849	Actin cytoskeleton-regulatory complex protein pan1. (1493 aa)
	T310_4727	SH3 domain protein. (1178 aa)
	T310_4431	VHS domain protein. (409 aa)
	T310_3764	EF hand domain protein. (1345 aa)
	T310_3317	Uncharacterized protein. (351 aa)
	T310_2538	Uncharacterized protein. (408 aa)
	T310_2819	Uncharacterized protein. (924 aa)
	T310_2105	Uncharacterized protein. (134 aa)
	T310_1684	EH domain-containing protein. (566 aa)
	T310_1620	Sulfate transporter. (756 aa)
	T310_1433	Actin, gamma. (375 aa)
	T310_1194	Lanthionine synthetase C family protein. (548 aa)
	T310_1085	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (177 aa)
	T310_1008	WH2 domain-containing protein. (458 aa)
	T310_0817	GTPase activating protein for Arf. (695 aa)
	T310_1084	Uncharacterized protein. (801 aa)
	T310_0515	Serine/threonine protein kinase. (1025 aa)
	T310_0179	C6 finger domain protein. (847 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_0515	T310_10256	A0A0F4Z5W2	A0A0F4YDJ7	Serine/threonine protein kinase.	Actin cytoskeleton-regulatory complex protein end3.	0.640
T310_0515	T310_1433	A0A0F4Z5W2	A0A0F4Z1Z0	Serine/threonine protein kinase.	Actin, gamma.	0.445
T310_0515	T310_1684	A0A0F4Z5W2	A0A0F4Z199	Serine/threonine protein kinase.	EH domain-containing protein.	0.604
T310_0515	T310_2105	A0A0F4Z5W2	A0A0F4Z045	Serine/threonine protein kinase.	Uncharacterized protein.	0.604
T310_0515	T310_2819	A0A0F4Z5W2	A0A0F4YZM2	Serine/threonine protein kinase.	Uncharacterized protein.	0.604
T310_0515	T310_3764	A0A0F4Z5W2	A0A0F4YVT7	Serine/threonine protein kinase.	EF hand domain protein.	0.930
T310_0515	T310_4571	A0A0F4Z5W2	A0A0F4YTG7	Serine/threonine protein kinase.	Ubiquitination network signaling protein.	0.604
T310_0515	T310_4913	A0A0F4Z5W2	A0A0F4YS27	Serine/threonine protein kinase.	Cell division control protein (Cdc15).	0.670
T310_0515	T310_6462	A0A0F4Z5W2	A0A0F4YN80	Serine/threonine protein kinase.	Uncharacterized protein.	0.640
T310_0515	T310_6466	A0A0F4Z5W2	A0A0F4YMS6	Serine/threonine protein kinase.	Vacuolar ATP synthase catalytic subunit A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.519
T310_0515	T310_9381	A0A0F4Z5W2	A0A0F4YHA0	Serine/threonine protein kinase.	Myosin ATPase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.411
T310_0817	T310_9634	A0A0F4Z3L5	A0A0F4YF62	GTPase activating protein for Arf.	Phosphoinositide 5-phosphatase.	0.403
T310_1008	T310_10256	A0A0F4Z365	A0A0F4YDJ7	WH2 domain-containing protein.	Actin cytoskeleton-regulatory complex protein end3.	0.472
T310_1008	T310_1084	A0A0F4Z365	A0A0F4Z4R8	WH2 domain-containing protein.	Uncharacterized protein.	0.623
T310_1008	T310_1085	A0A0F4Z365	A0A0F4Z2W8	WH2 domain-containing protein.	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.	0.623
T310_1008	T310_1433	A0A0F4Z365	A0A0F4Z1Z0	WH2 domain-containing protein.	Actin, gamma.	0.750
T310_1008	T310_2538	A0A0F4Z365	A0A0F4YYV0	WH2 domain-containing protein.	Uncharacterized protein.	0.722
T310_1008	T310_3317	A0A0F4Z365	A0A0F4YX32	WH2 domain-containing protein.	Uncharacterized protein.	0.722
T310_1008	T310_3764	A0A0F4Z365	A0A0F4YVT7	WH2 domain-containing protein.	EF hand domain protein.	0.506
T310_1008	T310_4913	A0A0F4Z365	A0A0F4YS27	WH2 domain-containing protein.	Cell division control protein (Cdc15).	0.584