42 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_0406	Peroxisome biosynthesis protein (PAS8/Peroxin-6). (1494 aa)
	T310_5611	DNA replication factor C subunit Rfc3. (385 aa)
	T310_5841	BCS1-like ATPase; Belongs to the AAA ATPase family. (534 aa)
	T310_6065	Activator 1 37 kDa subunit. (352 aa)
	T310_5651	Peroxisome biosynthesis protein (PAS1/Peroxin-1). (1233 aa)
	T310_6122	AAA domain-containing protein. (704 aa)
	T310_7111	Mitochondrial inner membrane AAA protease Yta12. (897 aa)
	T310_7320	Proteasome endopeptidase complex; Belongs to the AAA ATPase family. (465 aa)
	T310_8353	ATP-dependent Clp protease. (602 aa)
	T310_8161	Mitochondrial chaperone bcs1; Belongs to the AAA ATPase family. (577 aa)
	T310_7983	ATPase the helicase subunit of the Holliday junction resolvase. (451 aa)
	T310_9543	Replication factor C subunit 1. (1056 aa)
	T310_9994	Heat shock protein/chaperonin HSP78; Belongs to the ClpA/ClpB family. (788 aa)
	T310_10155	ATPase_AAA_core domain-containing protein. (928 aa)
	T310_10082	Uncharacterized protein. (1050 aa)
	T310_3966	AAA family ATPase. (1051 aa)
	T310_3994	Microtubule-severing ATPase; Belongs to the AAA ATPase family. (433 aa)
	T310_3329	Sister chromatid cohesion factor (Chl12). (1053 aa)
	T310_3726	Cell division control protein Cdc48; Belongs to the AAA ATPase family. (831 aa)
	T310_3241	AAA domain-containing protein. (1265 aa)
	T310_2896	AAA family ATPase; Belongs to the AAA ATPase family. Belongs to the mitochondrial carrier (TC 2.A.29) family. (1879 aa)
	T310_3155	Proteasome endopeptidase complex; Belongs to the AAA ATPase family. (404 aa)
	T310_2358	Mitochondrial chaperone Bcs1; Belongs to the AAA ATPase family. (499 aa)
	T310_2347	Vesicular fusion ATPase. (852 aa)
	T310_2074	AAA domain-containing protein. (653 aa)
	T310_3531	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (780 aa)
	T310_3865	Membrane-spanning ATPase. (1115 aa)
	T310_4257	Intermembrane space AAA protease IAP-1. (823 aa)
	T310_3954	Proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family. (376 aa)
	T310_4554	Proteasome regulatory particle subunit Rpt2; Belongs to the AAA ATPase family. (461 aa)
	T310_4689	Proteasome endopeptidase complex; Belongs to the AAA ATPase family. (465 aa)
	T310_4696	ATPase_AAA_core domain-containing protein. (738 aa)
	T310_5208	Adenosinetriphosphatase. (1672 aa)
	T310_5206	Mitochondrial AAA ATPase. (966 aa)
	T310_5153	Lon protease-like protein; Belongs to the peptidase S16 family. (842 aa)
	T310_2256	AAA family ATPase. (969 aa)
	T310_1816	Endopeptidase Clp; Belongs to the ClpA/ClpB family. (925 aa)
	T310_2030	AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
	T310_0380	AAA domain-containing protein. (729 aa)
	T310_0537	Cell division control protein Cdc6. (657 aa)
	PIM1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1124 aa)
	T310_0376	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family. (438 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIM1	T310_10082	A0A0F4Z5X4	A0A0F4YDT3	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Uncharacterized protein.	0.539
PIM1	T310_1816	A0A0F4Z5X4	A0A0F4Z0Z7	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Endopeptidase Clp; Belongs to the ClpA/ClpB family.	0.738
PIM1	T310_2358	A0A0F4Z5X4	A0A0F4YZ89	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Mitochondrial chaperone Bcs1; Belongs to the AAA ATPase family.	0.539
PIM1	T310_4257	A0A0F4Z5X4	A0A0F4YV70	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Intermembrane space AAA protease IAP-1.	0.691
PIM1	T310_5841	A0A0F4Z5X4	A0A0F4YQP4	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	BCS1-like ATPase; Belongs to the AAA ATPase family.	0.539
PIM1	T310_7111	A0A0F4Z5X4	A0A0F4YKW7	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Mitochondrial inner membrane AAA protease Yta12.	0.691
PIM1	T310_8161	A0A0F4Z5X4	A0A0F4YJ46	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Mitochondrial chaperone bcs1; Belongs to the AAA ATPase family.	0.539
PIM1	T310_8353	A0A0F4Z5X4	A0A0F4YJF1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	ATP-dependent Clp protease.	0.710
PIM1	T310_9994	A0A0F4Z5X4	A0A0F4YFN2	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Heat shock protein/chaperonin HSP78; Belongs to the ClpA/ClpB family.	0.734
T310_0376	T310_0406	A0A0F4Z648	A0A0F4Z5Z7	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	Peroxisome biosynthesis protein (PAS8/Peroxin-6).	0.452
T310_0376	T310_0537	A0A0F4Z648	A0A0F4Z5R2	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	Cell division control protein Cdc6.	0.762
T310_0376	T310_2030	A0A0F4Z648	A0A0F4Z240	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	AAA family ATPase/60S ribosome export protein Rix7.	0.486
T310_0376	T310_2256	A0A0F4Z648	A0A0F4Z0V4	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	AAA family ATPase.	0.705
T310_0376	T310_2347	A0A0F4Z648	A0A0F4YZW0	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	Vesicular fusion ATPase.	0.455
T310_0376	T310_2896	A0A0F4Z648	A0A0F4YXI2	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	AAA family ATPase; Belongs to the AAA ATPase family. Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.477
T310_0376	T310_3155	A0A0F4Z648	A0A0F4YY92	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	Proteasome endopeptidase complex; Belongs to the AAA ATPase family.	0.999
T310_0376	T310_3531	A0A0F4Z648	A0A0F4YVX3	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.	0.707
T310_0376	T310_3726	A0A0F4Z648	A0A0F4YWM0	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	Cell division control protein Cdc48; Belongs to the AAA ATPase family.	0.788
T310_0376	T310_3865	A0A0F4Z648	A0A0F4YVL6	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	Membrane-spanning ATPase.	0.494
T310_0376	T310_3954	A0A0F4Z648	A0A0F4YUZ9	Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.	Proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family.	0.999