44 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_10135	Aminotransferase. (560 aa)
	T310_9651	Aminotransferase. (404 aa)
	T310_9716	Beta_elim_lyase domain-containing protein. (501 aa)
	T310_8453	Cysteine desulfurase. (516 aa)
	T310_8442	Cystathionine beta-lyase. (479 aa)
	T310_7982	Kynurenine--oxoglutarate transaminase. (488 aa)
	T310_7441	Aspartate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (474 aa)
	T310_7395	Serine--pyruvate transaminase. (390 aa)
	T310_7290	Uncharacterized protein. (293 aa)
	T310_6560	Sphinganine-1-phosphate aldolase. (569 aa)
	T310_6209	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (462 aa)
	T310_6554	Aspartate aminotransferase. (429 aa)
	T310_6068	Phosphoserine transaminase. (445 aa)
	T310_5550	Cystathionine beta-lyase. (457 aa)
	BNA5	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family. (482 aa)
	T310_5080	Molybdopterin cofactor sulfurase. (830 aa)
	T310_4881	Serine C-palmitoyltransferase. (633 aa)
	T310_4864	Aspartate aminotransferase. (500 aa)
	T310_4081	5-aminolevulinate synthase. (656 aa)
	T310_3990	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (471 aa)
	T310_3869	Cystathionine gamma-lyase. (465 aa)
	T310_3702	O-acetylhomoserine aminocarboxypropyltransferase. (443 aa)
	T310_4030	4-aminobutyrate aminotransferase. (190 aa)
	T310_3777	O-acetylhomoserine aminocarboxypropyltransferase. (441 aa)
	T310_3175	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (535 aa)
	T310_3387	L-allo-threonine aldolase. (471 aa)
	T310_2933	1-aminocyclopropane-1-carboxylate deaminase. (439 aa)
	T310_2305	Aromatic-L-amino-acid decarboxylase. (516 aa)
	T310_2228	Aspartate aminotransferase. (459 aa)
	T310_1403	Onanonoxo-7-onima-8-eninoihtemlysoneda. (1231 aa)
	T310_1730	Histidinol-phosphate transaminase. (430 aa)
	T310_1143	Uncharacterized protein. (600 aa)
	T310_1095	Aspartate aminotransferase. (440 aa)
	BNA5-2	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family. (465 aa)
	T310_1047	Cystathionine gamma-lyase. (724 aa)
	T310_1419	Aminotransferase. (403 aa)
	T310_1402	8-amino-7-oxononanoate synthase. (413 aa)
	T310_0820	Ornithine aminotransferase. (464 aa)
	T310_0631	Aromatic-L-amino-acid decarboxylase. (524 aa)
	T310_0624	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1044 aa)
	T310_1075	Serine C-palmitoyltransferase. (743 aa)
	T310_0175	Alanine transaminase. (574 aa)
	T310_0450	O-acetylhomoserine (Thiol)-lyase. (380 aa)
	T310_0213	Cystathionine gamma-synthase. (607 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BNA5	BNA5-2	A0A0F4YSG8	A0A0F4Z332	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	0.883
BNA5	T310_0175	A0A0F4YSG8	A0A0F4Z5H8	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Alanine transaminase.	0.663
BNA5	T310_10135	A0A0F4YSG8	A0A0F4YDT4	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Aminotransferase.	0.595
BNA5	T310_2933	A0A0F4YSG8	A0A0F4YXT0	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	1-aminocyclopropane-1-carboxylate deaminase.	0.663
BNA5	T310_7982	A0A0F4YSG8	A0A0F4YJK5	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Kynurenine--oxoglutarate transaminase.	0.910
BNA5	T310_9651	A0A0F4YSG8	A0A0F4YET2	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Aminotransferase.	0.698
BNA5-2	BNA5	A0A0F4Z332	A0A0F4YSG8	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	0.883
BNA5-2	T310_0175	A0A0F4Z332	A0A0F4Z5H8	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Alanine transaminase.	0.663
BNA5-2	T310_10135	A0A0F4Z332	A0A0F4YDT4	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Aminotransferase.	0.595
BNA5-2	T310_2933	A0A0F4Z332	A0A0F4YXT0	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	1-aminocyclopropane-1-carboxylate deaminase.	0.663
BNA5-2	T310_7982	A0A0F4Z332	A0A0F4YJK5	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Kynurenine--oxoglutarate transaminase.	0.910
BNA5-2	T310_9651	A0A0F4Z332	A0A0F4YET2	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	Aminotransferase.	0.698
T310_0175	BNA5	A0A0F4Z5H8	A0A0F4YSG8	Alanine transaminase.	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	0.663
T310_0175	BNA5-2	A0A0F4Z5H8	A0A0F4Z332	Alanine transaminase.	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.	0.663
T310_0175	T310_0213	A0A0F4Z5H8	A0A0F4Z5Z0	Alanine transaminase.	Cystathionine gamma-synthase.	0.435
T310_0175	T310_0450	A0A0F4Z5H8	A0A0F4Z5W8	Alanine transaminase.	O-acetylhomoserine (Thiol)-lyase.	0.435
T310_0175	T310_0624	A0A0F4Z5H8	A0A0F4Z465	Alanine transaminase.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.761
T310_0175	T310_0820	A0A0F4Z5H8	A0A0F4Z437	Alanine transaminase.	Ornithine aminotransferase.	0.586
T310_0175	T310_10135	A0A0F4Z5H8	A0A0F4YDT4	Alanine transaminase.	Aminotransferase.	0.502
T310_0175	T310_1047	A0A0F4Z5H8	A0A0F4Z349	Alanine transaminase.	Cystathionine gamma-lyase.	0.463