4 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_5187	DNA-directed RNA polymerase. (339 aa)
	T310_1449	DNA-directed RNA polymerase. (140 aa)
	T310_1269	DNA-directed RNA polymerase. (374 aa)
	T310_4848	DNA-directed RNA polymerase. (133 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_1269	T310_1449	A0A0F4Z306	A0A0F4Z3S4	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.998
T310_1269	T310_4848	A0A0F4Z306	A0A0F4YSS3	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.978
T310_1269	T310_5187	A0A0F4Z306	A0A0F4YR68	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.781
T310_1449	T310_1269	A0A0F4Z3S4	A0A0F4Z306	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.998
T310_1449	T310_4848	A0A0F4Z3S4	A0A0F4YSS3	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.721
T310_1449	T310_5187	A0A0F4Z3S4	A0A0F4YR68	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.996
T310_4848	T310_1269	A0A0F4YSS3	A0A0F4Z306	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.978
T310_4848	T310_1449	A0A0F4YSS3	A0A0F4Z3S4	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.721
T310_4848	T310_5187	A0A0F4YSS3	A0A0F4YR68	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.997
T310_5187	T310_1269	A0A0F4YR68	A0A0F4Z306	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.781
T310_5187	T310_1449	A0A0F4YR68	A0A0F4Z3S4	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.996
T310_5187	T310_4848	A0A0F4YR68	A0A0F4YSS3	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.997