STRINGSTRING
T310_6350 T310_6350 SLX1 SLX1 T310_6498 T310_6498 T310_6722 T310_6722 T310_6788 T310_6788 T310_7109 T310_7109 T310_7512 T310_7512 T310_7614 T310_7614 T310_9467 T310_9467 T310_0541 T310_0541 T310_0369 T310_0369 T310_0105 T310_0105 T310_0707 T310_0707 T310_2055 T310_2055 T310_1906 T310_1906 T310_2308 T310_2308 T310_2409 T310_2409 T310_2371 T310_2371 T310_2679 T310_2679 T310_2950 T310_2950 T310_2685 T310_2685 T310_4513 T310_4513 T310_4184 T310_4184 T310_9486 T310_9486 T310_0415 T310_0415 T310_5671 T310_5671
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_6350Ubiquitin. (154 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (615 aa)
T310_6498DNA repair protein Mus81. (980 aa)
T310_6722Serine/threonine protein kinase; Belongs to the protein kinase superfamily. (395 aa)
T310_6788Uncharacterized protein. (446 aa)
T310_7109DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (646 aa)
T310_7512Serine/threonine protein kinase. (709 aa)
T310_7614Protein serine/threonine kinase (Ran1); Belongs to the protein kinase superfamily. (402 aa)
T310_9467Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (594 aa)
T310_05413'-5' exonuclease/helicase (Wrn). (1044 aa)
T310_0369BZIP domain-containing protein. (337 aa)
T310_0105RECA_2 domain-containing protein. (414 aa)
T310_0707Asparagine--tRNA ligase. (560 aa)
T310_2055ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (512 aa)
T310_1906ERCC4 domain-containing protein. (662 aa)
T310_2308RecQ family helicase MusN. (1607 aa)
T310_2409Uncharacterized protein. (394 aa)
T310_2371Rad2-like endonuclease. (1116 aa)
T310_2679DNA repair protein (Rad57). (527 aa)
T310_2950Serine/threonine protein kinase. (553 aa)
T310_2685Uncharacterized protein. (441 aa)
T310_4513Protein kinase. (869 aa)
T310_4184Serine/threonine protein kinase PRR2. (601 aa)
T310_9486DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (344 aa)
T310_0415Uncharacterized protein. (280 aa)
T310_5671DUF1767 domain-containing protein. (273 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
Server load: low (26%) [HD]