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T310_3829 T310_3829 T310_3986 T310_3986 RPS1 RPS1 T310_4071 T310_4071 T310_4046 T310_4046 T310_4582 T310_4582 T310_4635 T310_4635 T310_4894 T310_4894 T310_4311 T310_4311 T310_4939 T310_4939 T310_4892 T310_4892 T310_4530 T310_4530 T310_5183 T310_5183 T310_5213 T310_5213 T310_4808 T310_4808 YTM1 YTM1 T310_4631 T310_4631 T310_4861 T310_4861 T310_4759 T310_4759 T310_5273 T310_5273 T310_5338 T310_5338 T310_5154 T310_5154 T310_5389 T310_5389 T310_5795 T310_5795 T310_5114 T310_5114 T310_5135 T310_5135 T310_5822 T310_5822 T310_5180 T310_5180 T310_5886 T310_5886 T310_5334 T310_5334 T310_6001 T310_6001 T310_5461 T310_5461 T310_5548 T310_5548 T310_5755 T310_5755 T310_5642 T310_5642 T310_6072 T310_6072 T310_6328 T310_6328 T310_6153 T310_6153 T310_6074 T310_6074 T310_6296 T310_6296 T310_6601 T310_6601 T310_6578 T310_6578 T310_6696 T310_6696 T310_6691 T310_6691 T310_6749 T310_6749 T310_6807 T310_6807 T310_7406 T310_7406 T310_7016 T310_7016 T310_7287 T310_7287 T310_7089 T310_7089 T310_7341 T310_7341 T310_7286 T310_7286 T310_7330 T310_7330 T310_7312 T310_7312 T310_7392 T310_7392 T310_7845 T310_7845 T310_7859 T310_7859 T310_7895 T310_7895 T310_7890 T310_7890 T310_7533 T310_7533 T310_8399 T310_8399 T310_7792 T310_7792 T310_8382 T310_8382 T310_7966 T310_7966 T310_8169 T310_8169 T310_8192 T310_8192 T310_9250 T310_9250 T310_9276 T310_9276 T310_9989 T310_9989 T310_10121 T310_10121 T310_10035 T310_10035 T310_2691 T310_2691 T310_2442 T310_2442 RPS0 RPS0 T310_2842 T310_2842 T310_2423 T310_2423 T310_3210 T310_3210 NOP7 NOP7 T310_2745 T310_2745 T310_2924 T310_2924 T310_3148 T310_3148 T310_3459 T310_3459 T310_3209 T310_3209 T310_3321 T310_3321 T310_3731 T310_3731 T310_4042 T310_4042 T310_3677 T310_3677 T310_3503 T310_3503 T310_3593 T310_3593 T310_0199 T310_0199 T310_0020 T310_0020 T310_0293 T310_0293 T310_0024 T310_0024 T310_0601 T310_0601 T310_0044 T310_0044 T310_0547 T310_0547 T310_0057 T310_0057 T310_0212 T310_0212 T310_0299 T310_0299 T310_0361 T310_0361 T310_0801 T310_0801 T310_0603 T310_0603 T310_1049 T310_1049 T310_0468 T310_0468 T310_0498 T310_0498 T310_0649 T310_0649 T310_1180 T310_1180 T310_1345 T310_1345 T310_1544 T310_1544 T310_1192 T310_1192 T310_1803 T310_1803 T310_2020 T310_2020 T310_1560 T310_1560 T310_1420 T310_1420 T310_1769 T310_1769 T310_2065 T310_2065 SPB1 SPB1 T310_2136 T310_2136 T310_1954 T310_1954 T310_2457 T310_2457 T310_2534 T310_2534 T310_2064 T310_2064 ERB1 ERB1 T310_2044 T310_2044 T310_2786 T310_2786 T310_2805 T310_2805 T310_2382 T310_2382
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_3829Complex: RPS28B. (95 aa)
T310_3986Polynucleotide 5'-hydroxyl-kinase grc3. (802 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (275 aa)
T310_407160S ribosomal protein L8. (254 aa)
T310_4046Low-temperature viability protein ltv1. (516 aa)
T310_4582Uncharacterized protein. (461 aa)
T310_4635Small nucleolar ribonucleoprotein complex subunit. (1013 aa)
T310_4894WD repeat protein. (1047 aa)
T310_4311Small nucleolar ribonucleoprotein complex subunit. (1006 aa)
T310_4939Exosome complex endonuclease 1. (254 aa)
T310_4892DUF652 domain-containing protein. (207 aa)
T310_4530RNA 3'-terminal phosphate cyclase. (578 aa)
T310_5183RNase_PH domain-containing protein. (394 aa)
T310_5213Nop14-like family protein. (922 aa)
T310_4808Exosome complex endonuclease 2/ribosomal RNA processing protein. (138 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (444 aa)
T310_4631WD_REPEATS_REGION domain-containing protein. (637 aa)
T310_4861Uncharacterized protein. (92 aa)
T310_475940S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (215 aa)
T310_527320S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (428 aa)
T310_5338Carboxyl methylase. (279 aa)
T310_5154RIO1 family protein kinase. (657 aa)
T310_5389Ribosomal small subunit assembly protein. (326 aa)
T310_579540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (99 aa)
T310_511440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
T310_513540S ribosomal protein S19. (218 aa)
T310_5822Ribosomal protein S13p/S18e; Belongs to the universal ribosomal protein uS13 family. (180 aa)
T310_5180Uncharacterized protein. (843 aa)
T310_5886Small nucleolar ribonucleoprotein complex subunit (Pwp2). (908 aa)
T310_5334Pre-rRNA-processing protein PNO1. (260 aa)
T310_6001U3 small nucleolar RNA-associated protein 10. (1818 aa)
T310_546140S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (237 aa)
T310_5548Molybdopterin synthase sulfur carrier subunit. (118 aa)
T310_575560S ribosomal protein L28. (152 aa)
T310_56425'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1056 aa)
T310_6072RNH70 is involved in DNA replication and RNA processing. (308 aa)
T310_6328Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family. (130 aa)
T310_6153U3 small nucleolar ribonucleoprotein Mpp10. (813 aa)
T310_60743'-5' exoribonuclease. (265 aa)
T310_629640S ribosomal protein S9. (205 aa)
T310_6601Ribosome biogenesis protein (Bms1). (1841 aa)
T310_6578RNA helicase; Belongs to the DEAD box helicase family. (603 aa)
T310_6696Small nucleolar ribonucleoprotein complex subunit Utp14. (981 aa)
T310_669140S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (203 aa)
T310_6749WD domain protein. (910 aa)
T310_680740S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (266 aa)
T310_7406rRNA processing protein (Ebp2). (396 aa)
T310_7016Sec2p domain-containing protein. (307 aa)
T310_7287Pre-rRNA processing protein Tsr1. (811 aa)
T310_7089ToxD protein. (541 aa)
T310_7341Small nucleolar ribonucleoprotein complex subunit Utp15. (542 aa)
T310_7286Small nucleolar ribonucleoprotein complex subunit. (514 aa)
T310_7330DEAH-box RNA helicase (Dhr1). (1233 aa)
T310_73123' exoribonuclease family protein. (408 aa)
T310_7392Ribosomal protein of the small subunit rps28; Belongs to the universal ribosomal protein uS12 family. (145 aa)
T310_7845Ribosomal protein L34 protein. (120 aa)
T310_7859Uncharacterized protein. (275 aa)
T310_7895Small nucleolar ribonucleoprotein complex subunit. (449 aa)
T310_7890ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. (472 aa)
T310_7533U3 small nucleolar ribonucleoprotein IMP4. (411 aa)
T310_8399Non-specific serine/threonine protein kinase. (549 aa)
T310_7792Fibrillarin. (683 aa)
T310_838240S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
T310_7966Uncharacterized protein. (391 aa)
T310_8169Small nucleolar ribonucleoprotein complex component (Utp5). (863 aa)
T310_8192Uncharacterized protein. (167 aa)
T310_9250Exosome-associated protein. (277 aa)
T310_9276Ribosomal assembly complex component Ipi3. (614 aa)
T310_9989Sas10 domain-containing protein. (676 aa)
T310_10121Uncharacterized protein. (192 aa)
T310_10035Uncharacterized protein. (359 aa)
T310_2691rRNA biogenesis protein rrp36. (351 aa)
T310_2442Protein SIK1. (866 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (301 aa)
T310_2842HEAT repeat protein (DRIM). (2636 aa)
T310_2423Casein kinase I. (390 aa)
T310_3210Uncharacterized protein. (400 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (691 aa)
T310_2745RNA helicase. (770 aa)
T310_292440S ribosomal protein S10-B. (153 aa)
T310_314840S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
T310_3459Exosomal 3'-5' exoribonuclease complex. (384 aa)
T310_3209Uncharacterized protein. (366 aa)
T310_3321Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
T310_373160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (190 aa)
T310_4042RIX1 domain-containing protein. (821 aa)
T310_3677WD repeat protein. (1010 aa)
T310_3503Ribosomal RNA processing protein. (325 aa)
T310_3593Small nucleolar ribonucleoprotein complex subunit. (634 aa)
T310_0199Uncharacterized protein. (504 aa)
T310_002040S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
T310_0293rRNA biogenesis protein RRP5. (1830 aa)
T310_0024MYB DNA-binding domain protein. (689 aa)
T310_060140S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (143 aa)
T310_004440S ribosomal protein S15; Belongs to the eukaryotic ribosomal protein P1/P2 family. (334 aa)
T310_0547Uncharacterized protein. (221 aa)
T310_0057KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (373 aa)
T310_0212U3 small nucleolar RNA-associated protein 22. (1129 aa)
T310_0299RNase_PH domain-containing protein. (393 aa)
T310_0361Ribosome biogenesis (Nop4). (764 aa)
T310_0801Uncharacterized protein. (320 aa)
T310_060340S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (151 aa)
T310_104930S ribosomal subunit S4. (989 aa)
T310_046840S ribosomal protein S20. (213 aa)
T310_0498Uncharacterized protein. (599 aa)
T310_0649rRNA processing protein Bystin. (516 aa)
T310_1180RNA processing protein Emg1. (307 aa)
T310_1345Uncharacterized protein. (508 aa)
T310_1544Serine/threonine-protein kinase RIO1. (192 aa)
T310_119240S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
T310_180340S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
T310_2020U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (715 aa)
T310_1560Uncharacterized protein. (366 aa)
T310_1420rRNA processing protein Ipi1. (342 aa)
T310_1769U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (292 aa)
T310_2065ATP dependent RNA helicase (Dob1). (1079 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. Belongs to the class I-like SAM-binding methyltransferase superfamily. DOT1 family. (1445 aa)
T310_2136Ribosome biogenesis protein Noc4. (497 aa)
T310_1954GTP binding protein. (562 aa)
T310_2457Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (259 aa)
T310_2534Uncharacterized protein. (400 aa)
T310_2064Tethering factor for nuclear proteasome sts1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (317 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (796 aa)
T310_2044Uncharacterized protein. (1071 aa)
T310_2786RNA-3'-phosphate cyclase family protein. (455 aa)
T310_2805Ribonuclease P. (312 aa)
T310_2382Nucleolar protein 58. (610 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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