STRINGSTRING
T310_10017 T310_10017 T310_10106 T310_10106 T310_10071 T310_10071 T310_0965 T310_0965 T310_1613 T310_1613 T310_1069 T310_1069 LSM8 LSM8 T310_0852 T310_0852 T310_0857 T310_0857 T310_0695 T310_0695 T310_1323 T310_1323 T310_0845 T310_0845 T310_1223 T310_1223 T310_0972 T310_0972 T310_0987 T310_0987 T310_1059 T310_1059 T310_0918 T310_0918 T310_0923 T310_0923 T310_0317 T310_0317 T310_0679 T310_0679 T310_0755 T310_0755 T310_0090 T310_0090 T310_1033 T310_1033 T310_1220 T310_1220 T310_1210 T310_1210 T310_1115 T310_1115 T310_1727 T310_1727 T310_1694 T310_1694 T310_1314 T310_1314 T310_1735 T310_1735 T310_2015 T310_2015 T310_2128 T310_2128 T310_1868 T310_1868 T310_1488 T310_1488 T310_1672 T310_1672 T310_1779 T310_1779 T310_2185 T310_2185 T310_2070 T310_2070 T310_1671 T310_1671 T310_1962 T310_1962 T310_2032 T310_2032 T310_2027 T310_2027 T310_1894 T310_1894 T310_1869 T310_1869 T310_2212 T310_2212 T310_2512 T310_2512 T310_2791 T310_2791 T310_2303 T310_2303 T310_2293 T310_2293 T310_2947 T310_2947 T310_2779 T310_2779 T310_2355 T310_2355 T310_2925 T310_2925 T310_3200 T310_3200 T310_2876 T310_2876 T310_3203 T310_3203 T310_3532 T310_3532 T310_2928 T310_2928 T310_3502 T310_3502 T310_3604 T310_3604 T310_3111 T310_3111 T310_3197 T310_3197 T310_3713 T310_3713 T310_3693 T310_3693 T310_3024 T310_3024 T310_3515 T310_3515 T310_3291 T310_3291 T310_3509 T310_3509 T310_3889 T310_3889 T310_4121 T310_4121 T310_3570 T310_3570 T310_3664 T310_3664 T310_3632 T310_3632 T310_4180 T310_4180 T310_3756 T310_3756 T310_3910 T310_3910 T310_4508 T310_4508 CLP1 CLP1 T310_3957 T310_3957 T310_4019 T310_4019 T310_4004 T310_4004 T310_4261 T310_4261 T310_4763 T310_4763 T310_4557 T310_4557 T310_4299 T310_4299 T310_4208 T310_4208 T310_4672 T310_4672 T310_4421 T310_4421 T310_4418 T310_4418 T310_4925 T310_4925 T310_5181 T310_5181 T310_4633 T310_4633 T310_4675 T310_4675 T310_4848 T310_4848 T310_4636 T310_4636 T310_5374 T310_5374 T310_4822 T310_4822 T310_5407 T310_5407 T310_4807 T310_4807 T310_4900 T310_4900 T310_4858 T310_4858 T310_5542 T310_5542 T310_5096 T310_5096 T310_4945 T310_4945 T310_5112 T310_5112 T310_5618 T310_5618 T310_5437 T310_5437 T310_5445 T310_5445 T310_5704 T310_5704 T310_5197 T310_5197 T310_5187 T310_5187 T310_5326 T310_5326 T310_5756 T310_5756 T310_5521 T310_5521 T310_5397 T310_5397 T310_5889 T310_5889 T310_6187 T310_6187 T310_5969 T310_5969 T310_5543 T310_5543 T310_5541 T310_5541 T310_5802 T310_5802 T310_5627 T310_5627 T310_5607 T310_5607 T310_6148 T310_6148 T310_6165 T310_6165 T310_5834 T310_5834 T310_6089 T310_6089 T310_6079 T310_6079 T310_6756 T310_6756 T310_6096 T310_6096 T310_6863 T310_6863 T310_6259 T310_6259 T310_7042 T310_7042 T310_0093 T310_0093 T310_7082 T310_7082 T310_6886 T310_6886 T310_6511 T310_6511 T310_6954 T310_6954 T310_6580 T310_6580 T310_6555 T310_6555 T310_6656 T310_6656 T310_7329 T310_7329 T310_6773 T310_6773 T310_6932 T310_6932 T310_7024 T310_7024 T310_7044 T310_7044 T310_6931 T310_6931 T310_7078 T310_7078 T310_7847 T310_7847 T310_7377 T310_7377 T310_7314 T310_7314 T310_8015 T310_8015 T310_7468 T310_7468 T310_7880 T310_7880 T310_7625 T310_7625 T310_7530 T310_7530 T310_7675 T310_7675 T310_8367 T310_8367 T310_7844 T310_7844 T310_7879 T310_7879 T310_7827 T310_7827 T310_8244 T310_8244 T310_8276 T310_8276 T310_8031 T310_8031 T310_8130 T310_8130 T310_8263 T310_8263 T310_8072 T310_8072 T310_8176 T310_8176 T310_8249 T310_8249 T310_8252 T310_8252 T310_9305 T310_9305 T310_8858 T310_8858 T310_8510 T310_8510 T310_9487 T310_9487 T310_9292 T310_9292 T310_9257 T310_9257 T310_9510 T310_9510 T310_9356 T310_9356 T310_9511 T310_9511 T310_9629 T310_9629 T310_9604 T310_9604 T310_9664 T310_9664 T310_9770 T310_9770 T310_9750 T310_9750 T310_9844 T310_9844
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T310_10017DUF866 domain protein. (160 aa)
T310_10106RNA binding protein. (294 aa)
T310_10071Uncharacterized protein. (282 aa)
T310_0965Splicing factor 3B subunit 1. (1230 aa)
T310_1613PH domain protein. (1049 aa)
T310_1069Small nuclear ribonucleoprotein Sm D3. (193 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
T310_0852RRM domain-containing protein. (159 aa)
T310_0857Nucleoporin Nsp1. (692 aa)
T310_0695Propanediol-phosphate dehydrogenase. (257 aa)
T310_1323Endo-1,3(4)-beta-glucanase. (382 aa)
T310_0845WD repeat-containing protein jip5. (410 aa)
T310_1223BCAS2 family protein. (219 aa)
T310_0972SAP domain-containing protein. (279 aa)
T310_0987Transformer-SR ribonucleoprotein. (290 aa)
T310_1059SYF2 splicing factor domain protein. (400 aa)
T310_0918mRNA export factor mex67. (709 aa)
T310_0923DNA-directed RNA polymerase. (160 aa)
T310_0317RNA annealing protein Yra1. (278 aa)
T310_0679DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (130 aa)
T310_0755ATP-dependent RNA helicase (Hrh1). (805 aa)
T310_0090Non-repetitive nucleoporin. (2224 aa)
T310_1033Serine/threonine protein kinase (Prp4). (797 aa)
T310_1220Uncharacterized protein. (664 aa)
T310_121037S ribosomal protein MRP4. (183 aa)
T310_1115Uncharacterized protein. (211 aa)
T310_1727C2H2 finger domain protein. (291 aa)
T310_1694Tudor domain-containing protein. (302 aa)
T310_1314ATP dependent DNA ligase domain protein. (1667 aa)
T310_1735DNA-directed RNA polymerase. (235 aa)
T310_2015Uncharacterized protein. (205 aa)
T310_2128Transcription initiation factor iif, beta subunit. (403 aa)
T310_1868Uncharacterized protein. (141 aa)
T310_1488Nuclear pore protein (SEH1); Belongs to the WD repeat SEC13 family. (655 aa)
T310_1672Uncharacterized protein. (979 aa)
T310_1779DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1743 aa)
T310_2185Pre-mRNA splicing helicase. (2143 aa)
T310_2070Nuclear envelope protein. (641 aa)
T310_1671Ran-specific GTPase-activating protein 1. (254 aa)
T310_1962RNA helicase. (1227 aa)
T310_2032Arginine/serine-rich splicing factor. (944 aa)
T310_2027Uncharacterized protein. (614 aa)
T310_1894Peptidyl-prolyl cis-trans isomerase-like 3. (135 aa)
T310_1869Fip1 domain-containing protein. (341 aa)
T310_2212DUF455 domain protein. (1233 aa)
T310_2512Nuclear pore complex protein (SonA). (691 aa)
T310_2791WD_REPEATS_REGION domain-containing protein. (531 aa)
T310_2303KH domain RNA binding protein. (478 aa)
T310_2293Nuclear pore complex subunit Nup159. (1548 aa)
T310_2947Filament-forming protein (Tpr/p270). (2029 aa)
T310_2779Uncharacterized protein. (442 aa)
T310_2355Uncharacterized protein. (211 aa)
T310_2925Sde2_N_Ubi domain-containing protein. (1071 aa)
T310_3200Small nuclear ribonucleoprotein Sm D2. (176 aa)
T310_2876RED_N domain-containing protein. (582 aa)
T310_3203Microfibrillar-associated protein MfaP1. (537 aa)
T310_3532mRNA splicing protein (Prp5). (451 aa)
T310_2928Uncharacterized protein. (293 aa)
T310_3502G-patch domain protein. (1066 aa)
T310_3604mRNA splicing factor (Prp1/Zer1). (980 aa)
T310_3111RNA helicase. (825 aa)
T310_3197Nuclear pore complex subunit Nup192; Belongs to the cullin family. (2270 aa)
T310_3713Uncharacterized protein. (168 aa)
T310_3693U2 auxiliary factor small subunit. (204 aa)
T310_3024Uncharacterized protein. (822 aa)
T310_3515Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1047 aa)
T310_3291Uncharacterized protein. (656 aa)
T310_3509Nuclear mRNA splicing factor-associated protein. (400 aa)
T310_3889Poly(A)+ RNA export protein. (373 aa)
T310_4121Uncharacterized protein. (176 aa)
T310_3570Polyadenylation factor subunit CstF64. (249 aa)
T310_3664Uncharacterized protein. (353 aa)
T310_3632Pre-RNA splicing factor Slt11. (371 aa)
T310_4180RNA binding domain protein. (352 aa)
T310_3756PUM-HD domain-containing protein. (1048 aa)
T310_3910THO complex subunit Tho1. (467 aa)
T310_4508Pre-mRNA splicing factor ATP-dependent RNA helicase Prp43. (762 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (591 aa)
T310_3957Uncharacterized protein. (1050 aa)
T310_4019SAP domain-containing protein. (612 aa)
T310_4004RNP domain protein. (352 aa)
T310_4261Tuftelin-interacting protein TIP39. (785 aa)
T310_4763U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (548 aa)
T310_4557WD repeat protein. (726 aa)
T310_4299Sm domain-containing protein. (230 aa)
T310_4208Peptidylprolyl isomerase. (604 aa)
T310_4672Uncharacterized protein. (344 aa)
T310_4421U1 snRNP splicing complex subunit (Luc7). (212 aa)
T310_4418Uncharacterized protein. (579 aa)
T310_4925Pre-RNA splicing factor Srp2. (320 aa)
T310_5181WD repeat-containing protein. (466 aa)
T310_4633Ubiquitin thiolesterase. (645 aa)
T310_4675FHA domain protein SNIP1. (334 aa)
T310_4848DNA-directed RNA polymerase. (133 aa)
T310_4636G-patch domain protein (Spp2). (557 aa)
T310_5374Uncharacterized protein. (331 aa)
T310_4822DUF2040 domain-containing protein. (463 aa)
T310_5407Uncharacterized protein. (312 aa)
T310_4807Uncharacterized protein. (253 aa)
T310_4900Transcription initiation factor IIF. (720 aa)
T310_4858Nuclear protein SDK3. (330 aa)
T310_5542DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1241 aa)
T310_5096mRNA splicing factor RNA helicase (Cdc28). (1211 aa)
T310_4945Uncharacterized protein. (339 aa)
T310_5112Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (577 aa)
T310_5618R3H domain protein. (617 aa)
T310_5437mRNA splicing protein Yju2. (272 aa)
T310_5445RNA binding protein SwoK (Eurofung). (221 aa)
T310_5704mRNA 3'-end-processing protein rna14. (1034 aa)
T310_5197Peptidyl prolyl cis-trans isomerase Cyclophilin. (153 aa)
T310_5187DNA-directed RNA polymerase. (339 aa)
T310_5326U1 small nuclear ribonucleoprotein A. (197 aa)
T310_5756Splicing factor 3b subunit 4. (347 aa)
T310_5521Cap binding protein. (828 aa)
T310_5397U5 snRNP complex subunit. (358 aa)
T310_5889Transcriptional regulator Cwf13/SkiP. (589 aa)
T310_6187Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (588 aa)
T310_5969Uncharacterized protein. (259 aa)
T310_5543DUF1716 domain protein. (613 aa)
T310_5541Uncharacterized protein. (276 aa)
T310_5802U4/U6 small nuclear ribonucleoprotein. (585 aa)
T310_5627Uncharacterized protein. (280 aa)
T310_5607Peptidylprolyl isomerase. (576 aa)
T310_6148Nuclear pore complex subunit Nup133. (1346 aa)
T310_6165RNA binding protein. (302 aa)
T310_5834Arsenite resistance protein. (906 aa)
T310_6089NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. (1380 aa)
T310_6079U1 small nuclear ribonucleoprotein 70 kDa. (387 aa)
T310_6756Nucleoporin. (475 aa)
T310_6096U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (348 aa)
T310_6863F-box domain protein. (628 aa)
T310_6259Nucleoporin SONB. (1940 aa)
T310_7042Uncharacterized protein. (364 aa)
T310_0093Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
T310_7082Splicing factor 3a subunit 2. (235 aa)
T310_6886Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (165 aa)
T310_6511Uncharacterized protein. (1317 aa)
T310_6954PWI domain-containing protein. (568 aa)
T310_6580Zinc knuckle transcription factor/splicing factor MSL5/ZFM1. (559 aa)
T310_6555DNA binding protein SART-1. (729 aa)
T310_6656DnaJ domain protein. (214 aa)
T310_7329RNA binding protein. (226 aa)
T310_6773Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (186 aa)
T310_6932DNA-directed RNA polymerase. (217 aa)
T310_7024Uncharacterized protein. (516 aa)
T310_7044DNA directed RNA polymerase II 15 kDa subunit. (132 aa)
T310_6931Uncharacterized protein. (541 aa)
T310_7078Cell cycle control protein (Cwf19). (699 aa)
T310_7847Cactin. (545 aa)
T310_7377Uncharacterized protein. (545 aa)
T310_7314Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (160 aa)
T310_8015U5 snRNP component Snu114. (988 aa)
T310_7468Nuclear mRNA splicing factor. (1209 aa)
T310_7880Uncharacterized protein. (227 aa)
T310_7625PWI domain-containing protein. (524 aa)
T310_7530Nucleoporin (Nup184). (1903 aa)
T310_7675Pre-mRNA splicing factor. (1311 aa)
T310_8367mRNA splicing factor (Prp17). (582 aa)
T310_7844MPN domain-containing protein. (2332 aa)
T310_7879mRNA splicing factor (Prp18). (389 aa)
T310_7827CID domain-containing protein. (897 aa)
T310_8244RNA helicase-like splicing factor (HRH1). (1139 aa)
T310_8276WD domain, G-beta repeat protein. (1029 aa)
T310_8031Uncharacterized protein. (465 aa)
T310_8130Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (120 aa)
T310_8263mRNA splicing factor RNA helicase (Prp16). (920 aa)
T310_8072Complex: NXT1 binds to RNA binding mRNA-export factor TAP. (166 aa)
T310_8176G-patch DNA repair protein (Drt111). (533 aa)
T310_8249Uncharacterized protein. (229 aa)
T310_8252Nucleoporin NUP49/NSP49. (581 aa)
T310_9305mRNA splicing protein. (472 aa)
T310_8858MI domain-containing protein. (790 aa)
T310_8510RanBP1 domain protein. (1242 aa)
T310_9487Uncharacterized protein. (1336 aa)
T310_9292Cir_N domain-containing protein. (697 aa)
T310_9257Pre-mRNA splicing factor. (686 aa)
T310_9510Pre-mRNA splicing factor (Prp31). (523 aa)
T310_9356Cell division control protein (Cdc5). (791 aa)
T310_9511Cell cycle control protein (Cwf4). (775 aa)
T310_9629Splicing factor 3b, subunit 2. (558 aa)
T310_9604mRNA cleavage factor complex component Pcf11. (660 aa)
T310_9664Uncharacterized protein. (210 aa)
T310_9770KH domain RNA-binding protein. (357 aa)
T310_9750Uncharacterized protein. (369 aa)
T310_9844CID domain-containing protein. (540 aa)
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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