23 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

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co-expression

protein homology

Your Input:
	T310_1269	DNA-directed RNA polymerase. (374 aa)
	T310_10008	Uncharacterized protein. (288 aa)
	T310_9600	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1449 aa)
	T310_9616	MYB DNA-binding domain protein. (432 aa)
	T310_8298	TFIIIC transcription initiation factor complex subunits Tfc3. (1863 aa)
	T310_7604	Transcription factor TFIIIC complex subunit Tfc6. (780 aa)
	T310_7766	DNA-3-methyladenine glycosylase. (393 aa)
	T310_6496	Transcription initiation factor TFIIIB. (759 aa)
	T310_5440	RNA polymerase III transcription factor subunit. (626 aa)
	T310_5092	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (358 aa)
	T310_4927	RNA polymerase I and III transcription factor complex component Tbp. (294 aa)
	T310_4022	Uncharacterized protein. (650 aa)
	T310_4023	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (250 aa)
	T310_3755	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1224 aa)
	T310_3767	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (639 aa)
	T310_2704	Transcription factor TFIIIB component. (630 aa)
	T310_1913	DNA-directed RNA polymerase III RPC4. (259 aa)
	T310_1735	DNA-directed RNA polymerase. (235 aa)
	T310_0907	RNA polymerase III transcription factor TFIIIC subunit (Tfc4). (1078 aa)
	T310_0493	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
	T310_0923	DNA-directed RNA polymerase. (160 aa)
	T310_0679	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (130 aa)
	T310_0281	DNA-directed RNA polymerase III RPC4. (240 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_0281	T310_0493	A0A0F4Z6E1	A0A0F4Z4L0	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.972
T310_0281	T310_0679	A0A0F4Z6E1	A0A0F4Z5B0	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.970
T310_0281	T310_0907	A0A0F4Z6E1	A0A0F4Z3F1	DNA-directed RNA polymerase III RPC4.	RNA polymerase III transcription factor TFIIIC subunit (Tfc4).	0.960
T310_0281	T310_0923	A0A0F4Z6E1	A0A0F4Z590	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase.	0.968
T310_0281	T310_10008	A0A0F4Z6E1	A0A0F4YEN2	DNA-directed RNA polymerase III RPC4.	Uncharacterized protein.	0.979
T310_0281	T310_1269	A0A0F4Z6E1	A0A0F4Z306	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase.	0.973
T310_0281	T310_1735	A0A0F4Z6E1	A0A0F4Z293	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase.	0.969
T310_0281	T310_1913	A0A0F4Z6E1	A0A0F4Z0I0	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase III RPC4.	0.899
T310_0281	T310_2704	A0A0F4Z6E1	A0A0F4YYG1	DNA-directed RNA polymerase III RPC4.	Transcription factor TFIIIB component.	0.925
T310_0281	T310_3755	A0A0F4Z6E1	A0A0F4YWI6	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.971
T310_0281	T310_3767	A0A0F4Z6E1	A0A0F4YX64	DNA-directed RNA polymerase III RPC4.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.974
T310_0281	T310_4022	A0A0F4Z6E1	A0A0F4YV23	DNA-directed RNA polymerase III RPC4.	Uncharacterized protein.	0.916
T310_0281	T310_4023	A0A0F4Z6E1	A0A0F4YVT0	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.944
T310_0281	T310_4927	A0A0F4Z6E1	A0A0F4YTV2	DNA-directed RNA polymerase III RPC4.	RNA polymerase I and III transcription factor complex component Tbp.	0.915
T310_0281	T310_5092	A0A0F4Z6E1	A0A0F4YSP5	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.972
T310_0281	T310_5440	A0A0F4Z6E1	A0A0F4YQL2	DNA-directed RNA polymerase III RPC4.	RNA polymerase III transcription factor subunit.	0.720
T310_0281	T310_6496	A0A0F4Z6E1	A0A0F4YN27	DNA-directed RNA polymerase III RPC4.	Transcription initiation factor TFIIIB.	0.906
T310_0281	T310_7604	A0A0F4Z6E1	A0A0F4YJG4	DNA-directed RNA polymerase III RPC4.	Transcription factor TFIIIC complex subunit Tfc6.	0.479
T310_0281	T310_8298	A0A0F4Z6E1	A0A0F4YI31	DNA-directed RNA polymerase III RPC4.	TFIIIC transcription initiation factor complex subunits Tfc3.	0.400
T310_0281	T310_9600	A0A0F4Z6E1	A0A0F4YF84	DNA-directed RNA polymerase III RPC4.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.977