64 items (Rasamsonia emersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T310_2419	Uncharacterized protein. (301 aa)
	T310_9866	Integrase catalytic domain-containing protein. (1257 aa)
	T310_9842	TFIIH complex helicase Ssl2. (830 aa)
	T310_9954	Integrase catalytic domain-containing protein. (579 aa)
	T310_9732	Transposon-encoded protein with TYA. (603 aa)
	T310_9541	DNA replication factor C subunit Rfc5. (307 aa)
	T310_9458	Uncharacterized protein. (117 aa)
	T310_9543	Replication factor C subunit 1. (1056 aa)
	T310_9467	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (594 aa)
	T310_8931	Uncharacterized protein. (135 aa)
	T310_8628	Pol polyprotein. (142 aa)
	T310_8524	Uncharacterized protein. (270 aa)
	T310_8469	ERCC4 domain-containing protein. (831 aa)
	T310_8075	DNA-directed DNA polymerase. (546 aa)
	T310_7571	RNA polymerase II transcription factor protein. (1002 aa)
	T310_7855	ATP-depentend DNA helicase. (1051 aa)
	T310_6820	Rad4 family protein. (933 aa)
	T310_6788	Uncharacterized protein. (446 aa)
	T310_6649	Putative replication factor-a protein. (291 aa)
	T310_6493	UDP-galactopyranose mutase. (532 aa)
	T310_6483	DNA repair protein rad14. (577 aa)
	T310_6340	DNA excision repair protein Rad2. (1117 aa)
	T310_6205	Integrase catalytic domain-containing protein. (187 aa)
	T310_6065	Activator 1 37 kDa subunit. (352 aa)
	T310_5692	DNA ligase. (782 aa)
	T310_5611	DNA replication factor C subunit Rfc3. (385 aa)
	T310_5800	DNA repair helicase. (754 aa)
	T310_5437	mRNA splicing protein Yju2. (272 aa)
	T310_4938	DNA excision repair protein (Rad26L). (1033 aa)
	T310_4833	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (403 aa)
	T310_4504	Transcription factor TFIIH subunit Tfb4. (455 aa)
	T310_4605	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (462 aa)
	T310_4369	TPR domain protein. (487 aa)
	T310_4556	Cyclin Ccl1. (436 aa)
	T310_4709	WD repeat-containing protein. (531 aa)
	T310_4101	Nucleotide excision repair protein RAD23. (386 aa)
	T310_4195	Uncharacterized protein. (1557 aa)
	T310_4108	Ubiquitin ligase subunit HrtA. (136 aa)
	T310_3880	Gag/polymerase/env polyprotein. (909 aa)
	T310_3879	Retrovirus polyprotein. (533 aa)
	T310_4354	Uncharacterized protein. (184 aa)
	T310_3841	Non-specific serine/threonine protein kinase. (1215 aa)
	T310_4327	Transposon-encoded protein with TYA. (1466 aa)
	T310_4002	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2303 aa)
	T310_3616	DNA-directed DNA polymerase. (801 aa)
	T310_3913	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (433 aa)
	T310_3241	AAA domain-containing protein. (1265 aa)
	T310_3202	SsDNA binding protein Ssb3. (154 aa)
	T310_3451	Gag/polymerase/env polyprotein. (273 aa)
	T310_3121	Uncharacterized protein. (348 aa)
	T310_2355	Uncharacterized protein. (211 aa)
	T310_1894	Peptidyl-prolyl cis-trans isomerase-like 3. (135 aa)
	T310_1982	HMG box protein. (376 aa)
	T310_1710	DNA repair protein Rad4. (964 aa)
	T310_1942	DNA polymerase. (1105 aa)
	T310_0832	WD repeat protein. (416 aa)
	T310_0721	DNA ligase. (839 aa)
	T310_0896	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (1062 aa)
	T310_0380	AAA domain-containing protein. (729 aa)
	T310_0230	RNA helicase. (861 aa)
	T310_0188	Telomere silencing protein Zds1. (1122 aa)
	T310_0360	Mating-type switch/DNA repair protein Swi10/Rad10. (331 aa)
	T310_0007	UV-damaged DNA binding protein. (1123 aa)
	T310_0443	Reverse transcriptase domain-containing protein. (206 aa)

Your Current Organism:

Rasamsonia emersonii

NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T310_0007	T310_0230	A0A0F4Z6I7	A0A0F4Z5H2	UV-damaged DNA binding protein.	RNA helicase.	0.754
T310_0007	T310_0360	A0A0F4Z6I7	A0A0F4Z6D4	UV-damaged DNA binding protein.	Mating-type switch/DNA repair protein Swi10/Rad10.	0.819
T310_0007	T310_0380	A0A0F4Z6I7	A0A0F4Z5F8	UV-damaged DNA binding protein.	AAA domain-containing protein.	0.662
T310_0007	T310_0721	A0A0F4Z6I7	A0A0F4Z420	UV-damaged DNA binding protein.	DNA ligase.	0.717
T310_0007	T310_0832	A0A0F4Z6I7	A0A0F4Z3Q1	UV-damaged DNA binding protein.	WD repeat protein.	0.992
T310_0007	T310_0896	A0A0F4Z6I7	A0A0F4Z4K9	UV-damaged DNA binding protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.708
T310_0007	T310_1710	A0A0F4Z6I7	A0A0F4Z183	UV-damaged DNA binding protein.	DNA repair protein Rad4.	0.773
T310_0007	T310_1942	A0A0F4Z6I7	A0A0F4Z1P5	UV-damaged DNA binding protein.	DNA polymerase.	0.746
T310_0007	T310_3841	A0A0F4Z6I7	A0A0F4YV63	UV-damaged DNA binding protein.	Non-specific serine/threonine protein kinase.	0.927
T310_0007	T310_4002	A0A0F4Z6I7	A0A0F4YVW2	UV-damaged DNA binding protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.811
T310_0007	T310_4101	A0A0F4Z6I7	A0A0F4YUH9	UV-damaged DNA binding protein.	Nucleotide excision repair protein RAD23.	0.862
T310_0007	T310_4108	A0A0F4Z6I7	A0A0F4YUR3	UV-damaged DNA binding protein.	Ubiquitin ligase subunit HrtA.	0.985
T310_0007	T310_4504	A0A0F4Z6I7	A0A0F4YTA1	UV-damaged DNA binding protein.	Transcription factor TFIIH subunit Tfb4.	0.671
T310_0007	T310_4556	A0A0F4Z6I7	A0A0F4YTK6	UV-damaged DNA binding protein.	Cyclin Ccl1.	0.789
T310_0007	T310_4605	A0A0F4Z6I7	A0A0F4YTE0	UV-damaged DNA binding protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.675
T310_0007	T310_4709	A0A0F4Z6I7	A0A0F4YUH0	UV-damaged DNA binding protein.	WD repeat-containing protein.	0.983
T310_0007	T310_4833	A0A0F4Z6I7	A0A0F4YSQ2	UV-damaged DNA binding protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.709
T310_0007	T310_4938	A0A0F4Z6I7	A0A0F4YRW3	UV-damaged DNA binding protein.	DNA excision repair protein (Rad26L).	0.927
T310_0007	T310_5611	A0A0F4Z6I7	A0A0F4YR83	UV-damaged DNA binding protein.	DNA replication factor C subunit Rfc3.	0.664
T310_0007	T310_5692	A0A0F4Z6I7	A0A0F4YR04	UV-damaged DNA binding protein.	DNA ligase.	0.717