STRINGSTRING
GCA_000493815_00028 GCA_000493815_00028 rny rny GCA_000493815_01897 GCA_000493815_01897 GCA_000493815_01899 GCA_000493815_01899 GCA_000493815_01900 GCA_000493815_01900 cobS cobS CJ209_05335 CJ209_05335 cobT cobT GCA_000493815_01904 GCA_000493815_01904 GCA_000493815_01905 GCA_000493815_01905 GCA_000493815_01906 GCA_000493815_01906
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000493815_00028Unannotated protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (192 aa)
rnyUnannotated protein; Endoribonuclease that initiates mRNA decay. (522 aa)
GCA_000493815_01897Unannotated protein. (156 aa)
GCA_000493815_01899Unannotated protein. (246 aa)
GCA_000493815_01900Unannotated protein. (187 aa)
cobSUnannotated protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (276 aa)
CJ209_05335Unannotated protein; Belongs to the phosphoglycerate mutase family. (191 aa)
cobTUnannotated protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (354 aa)
GCA_000493815_01904Unannotated protein; Belongs to the UPF0758 family. (242 aa)
GCA_000493815_01905Unannotated protein. (308 aa)
GCA_000493815_01906Unannotated protein. (228 aa)
Your Current Organism:
Fusobacterium nucleatum W1481
NCBI taxonomy Id: 1408287
Other names: F. nucleatum W1481
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