10 items (Pneumocystis jirovecii RU7) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T551_03180	PH domain-containing protein. (1346 aa)
	T551_03310	Uncharacterized protein. (629 aa)
	T551_00265	Uncharacterized protein. (249 aa)
	T551_00798	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (106 aa)
	T551_00686	Uncharacterized protein. (136 aa)
	T551_01062	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1175 aa)
	T551_00917	Uncharacterized protein. (4322 aa)
	T551_02083	Actin-2; Belongs to the actin family. (385 aa)
	T551_02355	PIPK domain-containing protein. (651 aa)
	T551_03243	Uncharacterized protein; Belongs to the actin family. (419 aa)

Your Current Organism:

Pneumocystis jirovecii RU7

NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T551_00265	T551_00917	A0A0W4ZWM9	A0A0W4ZTE5	Uncharacterized protein.	Uncharacterized protein.	0.760
T551_00265	T551_02083	A0A0W4ZWM9	A0A0W4ZM78	Uncharacterized protein.	Actin-2; Belongs to the actin family.	0.594
T551_00265	T551_03180	A0A0W4ZWM9	A0A0W4ZFQ5	Uncharacterized protein.	PH domain-containing protein.	0.532
T551_00265	T551_03243	A0A0W4ZWM9	A0A0W4ZFT8	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.490
T551_00265	T551_03310	A0A0W4ZWM9	A0A0W4ZEN2	Uncharacterized protein.	Uncharacterized protein.	0.606
T551_00686	T551_00798	A0A0W4ZUK3	A0A0W4ZUU4	Uncharacterized protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.965
T551_00686	T551_00917	A0A0W4ZUK3	A0A0W4ZTE5	Uncharacterized protein.	Uncharacterized protein.	0.994
T551_00686	T551_03310	A0A0W4ZUK3	A0A0W4ZEN2	Uncharacterized protein.	Uncharacterized protein.	0.994
T551_00798	T551_00686	A0A0W4ZUU4	A0A0W4ZUK3	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	Uncharacterized protein.	0.965
T551_00798	T551_00917	A0A0W4ZUU4	A0A0W4ZTE5	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	Uncharacterized protein.	0.977
T551_00798	T551_02083	A0A0W4ZUU4	A0A0W4ZM78	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	Actin-2; Belongs to the actin family.	0.797
T551_00798	T551_03180	A0A0W4ZUU4	A0A0W4ZFQ5	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	PH domain-containing protein.	0.423
T551_00798	T551_03243	A0A0W4ZUU4	A0A0W4ZFT8	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	Uncharacterized protein; Belongs to the actin family.	0.775
T551_00798	T551_03310	A0A0W4ZUU4	A0A0W4ZEN2	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	Uncharacterized protein.	0.991
T551_00917	T551_00265	A0A0W4ZTE5	A0A0W4ZWM9	Uncharacterized protein.	Uncharacterized protein.	0.760
T551_00917	T551_00686	A0A0W4ZTE5	A0A0W4ZUK3	Uncharacterized protein.	Uncharacterized protein.	0.994
T551_00917	T551_00798	A0A0W4ZTE5	A0A0W4ZUU4	Uncharacterized protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.977
T551_00917	T551_02083	A0A0W4ZTE5	A0A0W4ZM78	Uncharacterized protein.	Actin-2; Belongs to the actin family.	0.898
T551_00917	T551_03180	A0A0W4ZTE5	A0A0W4ZFQ5	Uncharacterized protein.	PH domain-containing protein.	0.696
T551_00917	T551_03243	A0A0W4ZTE5	A0A0W4ZFT8	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.831