STRINGSTRING
T551_00427 T551_00427 T551_00143 T551_00143 T551_00929 T551_00929 T551_03569 T551_03569 URM1 URM1 T551_02008 T551_02008 T551_01148 T551_01148 T551_00847 T551_00847
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T551_00427Ubiquitin-like protein 5. (73 aa)
T551_00143NEDD8 protein. (61 aa)
T551_00929Ubiquitin-40S ribosomal protein S27a. (153 aa)
T551_03569Ubiquitin-60S ribosomal protein L40. (144 aa)
URM1Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (107 aa)
T551_02008Ubiquitin-60S ribosomal protein L40. (128 aa)
T551_01148Ubiquitin-like protein pmt3/smt3. (99 aa)
T551_00847Polyubiquitin. (181 aa)
Your Current Organism:
Pneumocystis jirovecii RU7
NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7
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