STRINGSTRING
T551_00847 T551_00847 T551_03569 T551_03569 T551_02008 T551_02008 T551_00143 T551_00143
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T551_00847Polyubiquitin. (181 aa)
T551_03569Ubiquitin-60S ribosomal protein L40. (144 aa)
T551_02008Ubiquitin-60S ribosomal protein L40. (128 aa)
T551_00143NEDD8 protein. (61 aa)
Your Current Organism:
Pneumocystis jirovecii RU7
NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.