25 items (Pneumocystis jirovecii RU7) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T551_03616	Ubiquitin-like domain-containing protein. (229 aa)
	T551_03569	Ubiquitin-60S ribosomal protein L40. (144 aa)
	T551_03228	OTU domain-containing protein. (321 aa)
	T551_02649	Uncharacterized protein. (124 aa)
	T551_02387	UBX domain-containing protein. (392 aa)
	T551_02401	UV excision repair protein Rad23. (369 aa)
	T551_02199	Uncharacterized protein. (230 aa)
	T551_01873	Uncharacterized protein. (362 aa)
	T551_02008	Ubiquitin-60S ribosomal protein L40. (128 aa)
	T551_01828	Ubiquitin-like domain-containing protein. (221 aa)
	T551_01261	UBX domain-containing protein. (289 aa)
	T551_00929	Ubiquitin-40S ribosomal protein S27a. (153 aa)
	T551_00991	UBX domain-containing protein. (489 aa)
	T551_01148	Ubiquitin-like protein pmt3/smt3. (99 aa)
	T551_00628	Uncharacterized protein. (98 aa)
	T551_00821	UBX domain-containing protein. (471 aa)
	T551_00831	Ubiquitin-like domain-containing protein. (403 aa)
	T551_00847	Polyubiquitin. (181 aa)
	T551_00830	UBX domain-containing protein. (452 aa)
	T551_00892	Uncharacterized protein. (373 aa)
	T551_00330	CAP-Gly domain-containing protein. (512 aa)
	T551_00427	Ubiquitin-like protein 5. (73 aa)
	T551_00093	Ubiquitin carboxyl-terminal hydrolase. (492 aa)
	T551_00113	Uncharacterized protein. (384 aa)
	T551_00143	NEDD8 protein. (61 aa)

Your Current Organism:

Pneumocystis jirovecii RU7

NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T551_00093	T551_00143	A0A0W4ZW57	A0A0W4ZWA0	Ubiquitin carboxyl-terminal hydrolase.	NEDD8 protein.	0.860
T551_00093	T551_00847	A0A0W4ZW57	A0A0W4ZUV9	Ubiquitin carboxyl-terminal hydrolase.	Polyubiquitin.	0.989
T551_00093	T551_00892	A0A0W4ZW57	A0A0W4ZV07	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.927
T551_00093	T551_00929	A0A0W4ZW57	A0A0W4ZTK0	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-40S ribosomal protein S27a.	0.975
T551_00093	T551_01148	A0A0W4ZW57	A0A0W4ZU13	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like protein pmt3/smt3.	0.515
T551_00093	T551_01828	A0A0W4ZW57	A0A0W4ZQA7	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like domain-containing protein.	0.893
T551_00093	T551_02008	A0A0W4ZW57	A0A0W4ZNX2	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-60S ribosomal protein L40.	0.918
T551_00093	T551_02401	A0A0W4ZW57	A0A0W4ZL82	Ubiquitin carboxyl-terminal hydrolase.	UV excision repair protein Rad23.	0.902
T551_00093	T551_03228	A0A0W4ZW57	A0A0W4ZFU4	Ubiquitin carboxyl-terminal hydrolase.	OTU domain-containing protein.	0.575
T551_00093	T551_03569	A0A0W4ZW57	A0A0W4ZD85	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-60S ribosomal protein L40.	0.893
T551_00113	T551_00143	A0A0W4ZW78	A0A0W4ZWA0	Uncharacterized protein.	NEDD8 protein.	0.448
T551_00113	T551_00821	A0A0W4ZW78	A0A0W4ZUS8	Uncharacterized protein.	UBX domain-containing protein.	0.982
T551_00113	T551_00830	A0A0W4ZW78	A0A0W4ZUX0	Uncharacterized protein.	UBX domain-containing protein.	0.993
T551_00113	T551_00847	A0A0W4ZW78	A0A0W4ZUV9	Uncharacterized protein.	Polyubiquitin.	0.699
T551_00113	T551_00892	A0A0W4ZW78	A0A0W4ZV07	Uncharacterized protein.	Uncharacterized protein.	0.434
T551_00113	T551_00929	A0A0W4ZW78	A0A0W4ZTK0	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.433
T551_00113	T551_00991	A0A0W4ZW78	A0A0W4ZTL5	Uncharacterized protein.	UBX domain-containing protein.	0.965
T551_00113	T551_01261	A0A0W4ZW78	A0A0W4ZS56	Uncharacterized protein.	UBX domain-containing protein.	0.902
T551_00113	T551_01828	A0A0W4ZW78	A0A0W4ZQA7	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.534
T551_00113	T551_02387	A0A0W4ZW78	A0A0W4ZL59	Uncharacterized protein.	UBX domain-containing protein.	0.877