27 items (Pneumocystis jirovecii RU7) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T551_03113	CPSF_A domain-containing protein. (1093 aa)
	T551_00033	E3 ubiquitin-protein ligase RBX1. (148 aa)
	T551_00543	Replication factor C subunit 1. (960 aa)
	T551_05052	RPA_C domain-containing protein. (294 aa)
	T551_00392	DNA repair protein rad18. (269 aa)
	T551_00847	Polyubiquitin. (181 aa)
	T551_00843	Uncharacterized protein. (467 aa)
	T551_00929	Ubiquitin-40S ribosomal protein S27a. (153 aa)
	T551_01314	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2179 aa)
	T551_01233	DNA_pol_E_B domain-containing protein. (634 aa)
	T551_01210	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (598 aa)
	T551_01564	CULLIN_2 domain-containing protein; Belongs to the cullin family. (820 aa)
	T551_01850	Replication factor C subunit 3. (356 aa)
	T551_01791	Zds_C domain-containing protein. (750 aa)
	T551_01736	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (150 aa)
	T551_02044	DNA polymerase. (1088 aa)
	T551_02031	WD_REPEATS_REGION domain-containing protein. (435 aa)
	T551_01874	Uncharacterized protein. (200 aa)
	T551_02170	Uncharacterized protein. (265 aa)
	T551_02283	Replication factor C subunit 4. (351 aa)
	T551_02613	Uncharacterized protein. (103 aa)
	T551_02853	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (250 aa)
	T551_02820	Uncharacterized protein. (351 aa)
	T551_03155	CBFD_NFYB_HMF domain-containing protein. (152 aa)
	T551_03135	Uncharacterized protein. (146 aa)
	T551_03382	AAA domain-containing protein. (361 aa)
	T551_03334	Ubiquitin carboxyl-terminal hydrolase. (587 aa)

Your Current Organism:

Pneumocystis jirovecii RU7

NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T551_00033	T551_00392	A0A0W4ZW10	A0A0W4ZV97	E3 ubiquitin-protein ligase RBX1.	DNA repair protein rad18.	0.711
T551_00033	T551_00543	A0A0W4ZW10	A0A0W4ZVQ2	E3 ubiquitin-protein ligase RBX1.	Replication factor C subunit 1.	0.631
T551_00033	T551_00843	A0A0W4ZW10	A0A0W4ZUV7	E3 ubiquitin-protein ligase RBX1.	Uncharacterized protein.	0.629
T551_00033	T551_00847	A0A0W4ZW10	A0A0W4ZUV9	E3 ubiquitin-protein ligase RBX1.	Polyubiquitin.	0.913
T551_00033	T551_00929	A0A0W4ZW10	A0A0W4ZTK0	E3 ubiquitin-protein ligase RBX1.	Ubiquitin-40S ribosomal protein S27a.	0.919
T551_00033	T551_01233	A0A0W4ZW10	A0A0W4ZS02	E3 ubiquitin-protein ligase RBX1.	DNA_pol_E_B domain-containing protein.	0.834
T551_00033	T551_01314	A0A0W4ZW10	A0A0W4ZS83	E3 ubiquitin-protein ligase RBX1.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.840
T551_00033	T551_01564	A0A0W4ZW10	A0A0W4ZRN1	E3 ubiquitin-protein ligase RBX1.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.998
T551_00033	T551_01736	A0A0W4ZW10	A0A0W4ZPZ9	E3 ubiquitin-protein ligase RBX1.	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	0.884
T551_00033	T551_01850	A0A0W4ZW10	A0A0W4ZQC3	E3 ubiquitin-protein ligase RBX1.	Replication factor C subunit 3.	0.661
T551_00033	T551_01874	A0A0W4ZW10	A0A0W4ZNI7	E3 ubiquitin-protein ligase RBX1.	Uncharacterized protein.	0.599
T551_00033	T551_02031	A0A0W4ZW10	A0A0W4ZNX8	E3 ubiquitin-protein ligase RBX1.	WD_REPEATS_REGION domain-containing protein.	0.996
T551_00033	T551_02044	A0A0W4ZW10	A0A0W4ZP06	E3 ubiquitin-protein ligase RBX1.	DNA polymerase.	0.739
T551_00033	T551_02170	A0A0W4ZW10	A0A0W4ZMF4	E3 ubiquitin-protein ligase RBX1.	Uncharacterized protein.	0.647
T551_00033	T551_02283	A0A0W4ZW10	A0A0W4ZKV3	E3 ubiquitin-protein ligase RBX1.	Replication factor C subunit 4.	0.661
T551_00033	T551_02820	A0A0W4ZW10	A0A0W4ZHL0	E3 ubiquitin-protein ligase RBX1.	Uncharacterized protein.	0.663
T551_00033	T551_02853	A0A0W4ZW10	A0A0W4ZHN6	E3 ubiquitin-protein ligase RBX1.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.672
T551_00033	T551_03113	A0A0W4ZW10	A0A0W4ZFF4	E3 ubiquitin-protein ligase RBX1.	CPSF_A domain-containing protein.	0.999
T551_00033	T551_03334	A0A0W4ZW10	A0A0W4ZET2	E3 ubiquitin-protein ligase RBX1.	Ubiquitin carboxyl-terminal hydrolase.	0.625
T551_00033	T551_03382	A0A0W4ZW10	A0A0W4ZEZ3	E3 ubiquitin-protein ligase RBX1.	AAA domain-containing protein.	0.669