14 items (Pneumocystis jirovecii RU7) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T551_03153	Serine/threonine-protein phosphatase. (328 aa)
	T551_02990	Uncharacterized protein. (315 aa)
	T551_02697	CHCH domain-containing protein. (83 aa)
	T551_02571	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (353 aa)
	T551_02290	Uncharacterized protein. (1035 aa)
	T551_02359	Uncharacterized protein. (227 aa)
	T551_02367	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (358 aa)
	T551_02107	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (347 aa)
	T551_01825	Uncharacterized protein. (134 aa)
	T551_00929	Ubiquitin-40S ribosomal protein S27a. (153 aa)
	T551_00847	Polyubiquitin. (181 aa)
	T551_00242	Uncharacterized protein. (587 aa)
	T551_00253	Uncharacterized protein. (341 aa)
	T551_00283	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (408 aa)

Your Current Organism:

Pneumocystis jirovecii RU7

NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T551_00242	T551_00283	A0A0W4ZWJ8	A0A0W4ZWR3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.566
T551_00242	T551_00847	A0A0W4ZWJ8	A0A0W4ZUV9	Uncharacterized protein.	Polyubiquitin.	0.666
T551_00242	T551_00929	A0A0W4ZWJ8	A0A0W4ZTK0	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.644
T551_00242	T551_02107	A0A0W4ZWJ8	A0A0W4ZMA8	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.635
T551_00242	T551_02367	A0A0W4ZWJ8	A0A0W4ZL45	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.635
T551_00242	T551_02571	A0A0W4ZWJ8	A0A0W4ZK10	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.566
T551_00242	T551_03153	A0A0W4ZWJ8	A0A0W4ZFL6	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.999
T551_00253	T551_00283	A0A0W4ZWL6	A0A0W4ZWR3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.441
T551_00253	T551_00847	A0A0W4ZWL6	A0A0W4ZUV9	Uncharacterized protein.	Polyubiquitin.	0.535
T551_00253	T551_00929	A0A0W4ZWL6	A0A0W4ZTK0	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.552
T551_00253	T551_01825	A0A0W4ZWL6	A0A0W4ZQA0	Uncharacterized protein.	Uncharacterized protein.	0.541
T551_00253	T551_02107	A0A0W4ZWL6	A0A0W4ZMA8	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.997
T551_00253	T551_02359	A0A0W4ZWL6	A0A0W4ZL23	Uncharacterized protein.	Uncharacterized protein.	0.774
T551_00253	T551_02367	A0A0W4ZWL6	A0A0W4ZL45	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.977
T551_00253	T551_02571	A0A0W4ZWL6	A0A0W4ZK10	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.488
T551_00253	T551_02697	A0A0W4ZWL6	A0A0W4ZIS5	Uncharacterized protein.	CHCH domain-containing protein.	0.774
T551_00253	T551_03153	A0A0W4ZWL6	A0A0W4ZFL6	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.458
T551_00283	T551_00242	A0A0W4ZWR3	A0A0W4ZWJ8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.566
T551_00283	T551_00253	A0A0W4ZWR3	A0A0W4ZWL6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.441
T551_00283	T551_02107	A0A0W4ZWR3	A0A0W4ZMA8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.991