STRINGSTRING
T551_00736 T551_00736 T551_00559 T551_00559 T551_03524 T551_03524 T551_03558 T551_03558 T551_03415 T551_03415 T551_03462 T551_03462 T551_03128 T551_03128 T551_02538 T551_02538 T551_02380 T551_02380 SUS1 SUS1 T551_01817 T551_01817 T551_01485 T551_01485 T551_00095 T551_00095 T551_01549 T551_01549 T551_01610 T551_01610 T551_01628 T551_01628 T551_01275 T551_01275 T551_00610 T551_00610 T551_00608 T551_00608 T551_00653 T551_00653 T551_00491 T551_00491
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T551_00736SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...] (156 aa)
T551_00559Uncharacterized protein. (773 aa)
T551_03524Uncharacterized protein. (1140 aa)
T551_03558SGF29 C-terminal domain-containing protein. (270 aa)
T551_03415Uncharacterized protein. (321 aa)
T551_03462MRG domain-containing protein. (308 aa)
T551_03128Uncharacterized protein. (352 aa)
T551_02538YL1_C domain-containing protein. (463 aa)
T551_02380Uncharacterized protein. (280 aa)
SUS1Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (104 aa)
T551_01817RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (461 aa)
T551_01485Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (396 aa)
T551_00095Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1247 aa)
T551_01549Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (556 aa)
T551_01610Histone H2B; Belongs to the histone H2B family. (134 aa)
T551_01628Histone H2B; Belongs to the histone H2B family. (226 aa)
T551_01275Negative cofactor 2 complex subunit beta. (137 aa)
T551_00610Uncharacterized protein. (231 aa)
T551_00608Uncharacterized protein. (299 aa)
T551_00653SANT domain-containing protein. (446 aa)
T551_00491Uncharacterized protein. (224 aa)
Your Current Organism:
Pneumocystis jirovecii RU7
NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7
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