STRINGSTRING
T551_02953 T551_02953 T551_00304 T551_00304 T551_00218 T551_00218 T551_00133 T551_00133 T551_00087 T551_00087 T551_00033 T551_00033 T551_00543 T551_00543 T551_00530 T551_00530 T551_00518 T551_00518 T551_00487 T551_00487 T551_05052 T551_05052 T551_00347 T551_00347 T551_00847 T551_00847 T551_00843 T551_00843 T551_00797 T551_00797 T551_00772 T551_00772 T551_01118 T551_01118 T551_01119 T551_01119 T551_01103 T551_01103 T551_01049 T551_01049 T551_00929 T551_00929 T551_00918 T551_00918 T551_01406 T551_01406 T551_01394 T551_01394 T551_01314 T551_01314 T551_01221 T551_01221 T551_01233 T551_01233 T551_01220 T551_01220 T551_01210 T551_01210 T551_01639 T551_01639 T551_01564 T551_01564 T551_01453 T551_01453 T551_01442 T551_01442 T551_01849 T551_01849 T551_01850 T551_01850 T551_01797 T551_01797 T551_01791 T551_01791 T551_01770 T551_01770 T551_01745 T551_01745 T551_02044 T551_02044 T551_01988 T551_01988 T551_01969 T551_01969 T551_01910 T551_01910 T551_01874 T551_01874 T551_02170 T551_02170 T551_02136 T551_02136 T551_02081 T551_02081 T551_02401 T551_02401 T551_02358 T551_02358 T551_02339 T551_02339 T551_02283 T551_02283 T551_02761 T551_02761 T551_02688 T551_02688 T551_02613 T551_02613 T551_02864 T551_02864 T551_02853 T551_02853 T551_02820 T551_02820 T551_03048 T551_03048 T551_03015 T551_03015 T551_03650 T551_03650 T551_03614 T551_03614 T551_03621 T551_03621 T551_03593 T551_03593 T551_03433 T551_03433 T551_03430 T551_03430 T551_03265 T551_03265 T551_03325 T551_03325 T551_03374 T551_03374 T551_03382 T551_03382 T551_03113 T551_03113 T551_03135 T551_03135 T551_03155 T551_03155 T551_03181 T551_03181 T551_03140 T551_03140
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T551_02953Protein kinase domain-containing protein. (344 aa)
T551_00304Uncharacterized protein. (1037 aa)
T551_00218ERCC4 domain-containing protein. (919 aa)
T551_00133Uncharacterized protein. (844 aa)
T551_00087WD_REPEATS_REGION domain-containing protein. (499 aa)
T551_00033E3 ubiquitin-protein ligase RBX1. (148 aa)
T551_00543Replication factor C subunit 1. (960 aa)
T551_00530PCI domain-containing protein. (420 aa)
T551_00518RNA_pol_L_2 domain-containing protein. (122 aa)
T551_00487Uncharacterized protein; Belongs to the peptidase C19 family. (1123 aa)
T551_05052RPA_C domain-containing protein. (294 aa)
T551_00347DNA-directed RNA polymerase I, II, and III subunit RPABC5. (72 aa)
T551_00847Polyubiquitin. (181 aa)
T551_00843Uncharacterized protein. (467 aa)
T551_00797DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1218 aa)
T551_00772RRM domain-containing protein. (149 aa)
T551_01118Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1366 aa)
T551_01119RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (457 aa)
T551_01103Uncharacterized protein. (1045 aa)
T551_01049DNA repair helicase rad15. (784 aa)
T551_00929Ubiquitin-40S ribosomal protein S27a. (153 aa)
T551_00918Uncharacterized protein. (818 aa)
T551_01406PCI domain-containing protein. (434 aa)
T551_01394DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1771 aa)
T551_01314DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2179 aa)
T551_01221Uncharacterized protein. (442 aa)
T551_01233DNA_pol_E_B domain-containing protein. (634 aa)
T551_01220Uncharacterized protein. (264 aa)
T551_01210Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (598 aa)
T551_01639Uncharacterized protein. (161 aa)
T551_01564CULLIN_2 domain-containing protein; Belongs to the cullin family. (820 aa)
T551_01453RPOL4c domain-containing protein. (149 aa)
T551_01442Uncharacterized protein. (426 aa)
T551_01849DNA repair protein. (297 aa)
T551_01850Replication factor C subunit 3. (356 aa)
T551_01797TFIIS central domain-containing protein. (878 aa)
T551_01791Zds_C domain-containing protein. (750 aa)
T551_01770CDK-activating kinase assembly factor MAT1. (326 aa)
T551_01745Uncharacterized protein. (211 aa)
T551_02044DNA polymerase. (1088 aa)
T551_01988General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (447 aa)
T551_01969DNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (708 aa)
T551_01910Uncharacterized protein; Belongs to the actin family. (717 aa)
T551_01874Uncharacterized protein. (200 aa)
T551_02170Uncharacterized protein. (265 aa)
T551_02136Uncharacterized protein. (248 aa)
T551_02081Uncharacterized protein. (69 aa)
T551_02401UV excision repair protein Rad23. (369 aa)
T551_02358WD_REPEATS_REGION domain-containing protein. (509 aa)
T551_02339Uncharacterized protein. (235 aa)
T551_02283Replication factor C subunit 4. (351 aa)
T551_02761Uncharacterized protein. (339 aa)
T551_02688Uncharacterized protein. (171 aa)
T551_02613Uncharacterized protein. (103 aa)
T551_02864RPOL9 domain-containing protein. (103 aa)
T551_02853Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (250 aa)
T551_02820Uncharacterized protein. (351 aa)
T551_03048Uncharacterized protein. (719 aa)
T551_03015Uncharacterized protein. (307 aa)
T551_03650Uncharacterized protein. (1052 aa)
T551_03614RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (481 aa)
T551_03621RPOLD domain-containing protein. (297 aa)
T551_03593DNA-directed RNA polymerase II subunit rpb7. (182 aa)
T551_03433YL1_C domain-containing protein. (124 aa)
T551_03430CYCLIN domain-containing protein; Belongs to the cyclin family. (349 aa)
T551_03265Uncharacterized protein. (1276 aa)
T551_03325DNA-directed RNA polymerase I, II, and III subunit RPABC4. (68 aa)
T551_03374Transcription elongation factor S-II. (288 aa)
T551_03382AAA domain-containing protein. (361 aa)
T551_03113CPSF_A domain-containing protein. (1093 aa)
T551_03135Uncharacterized protein. (146 aa)
T551_03155CBFD_NFYB_HMF domain-containing protein. (152 aa)
T551_03181Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (451 aa)
T551_03140DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (126 aa)
Your Current Organism:
Pneumocystis jirovecii RU7
NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7
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