STRINGSTRING
T551_02547 T551_02547 T551_02432 T551_02432 T551_01433 T551_01433 T551_01210 T551_01210 T551_01269 T551_01269 T551_00929 T551_00929 T551_00847 T551_00847 SLX1 SLX1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T551_02547Asparagine-tRNA ligase. (563 aa)
T551_02432NTF2 domain-containing protein. (124 aa)
T551_01433DRMBL domain-containing protein. (614 aa)
T551_01210Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (598 aa)
T551_01269Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2456 aa)
T551_00929Ubiquitin-40S ribosomal protein S27a. (153 aa)
T551_00847Polyubiquitin. (181 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (359 aa)
Your Current Organism:
Pneumocystis jirovecii RU7
NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7
Server load: low (14%) [HD]