28 items (Pneumocystis jirovecii RU7) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T551_03208	Uncharacterized protein. (436 aa)
	T551_03430	CYCLIN domain-containing protein; Belongs to the cyclin family. (349 aa)
	T551_03330	Uncharacterized protein. (669 aa)
	T551_03325	DNA-directed RNA polymerase I, II, and III subunit RPABC4. (68 aa)
	T551_03140	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (126 aa)
	T551_02953	Protein kinase domain-containing protein. (344 aa)
	T551_03015	Uncharacterized protein. (307 aa)
	T551_02761	Uncharacterized protein. (339 aa)
	T551_02081	Uncharacterized protein. (69 aa)
	T551_02073	Uncharacterized protein. (1440 aa)
	T551_01948	SAP30_Sin3_bdg domain-containing protein. (130 aa)
	T551_01988	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (447 aa)
	T551_02008	Ubiquitin-60S ribosomal protein L40. (128 aa)
	T551_01679	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1163 aa)
	T551_01745	Uncharacterized protein. (211 aa)
	T551_01770	CDK-activating kinase assembly factor MAT1. (326 aa)
	T551_01610	Histone H2B; Belongs to the histone H2B family. (134 aa)
	T551_01628	Histone H2B; Belongs to the histone H2B family. (226 aa)
	T551_01639	Uncharacterized protein. (161 aa)
	T551_01288	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1687 aa)
	T551_05056	TATA-box-binding protein. (241 aa)
	T551_00995	RRN7-type domain-containing protein. (493 aa)
	T551_01049	DNA repair helicase rad15. (784 aa)
	T551_01066	RPOLD domain-containing protein. (350 aa)
	T551_01119	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (457 aa)
	T551_00869	Uncharacterized protein. (229 aa)
	T551_00347	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (72 aa)
	T551_00133	Uncharacterized protein. (844 aa)

Your Current Organism:

Pneumocystis jirovecii RU7

NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T551_00133	T551_00347	A0A0W4ZW87	A0A0W4ZV84	Uncharacterized protein.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.952
T551_00133	T551_00995	A0A0W4ZW87	A0A0W4ZTP5	Uncharacterized protein.	RRN7-type domain-containing protein.	0.619
T551_00133	T551_01049	A0A0W4ZW87	A0A0W4ZTS7	Uncharacterized protein.	DNA repair helicase rad15.	0.999
T551_00133	T551_01066	A0A0W4ZW87	A0A0W4ZTV9	Uncharacterized protein.	RPOLD domain-containing protein.	0.922
T551_00133	T551_01119	A0A0W4ZW87	A0A0W4ZTZ6	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
T551_00133	T551_01288	A0A0W4ZW87	A0A0W4ZS94	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.752
T551_00133	T551_01610	A0A0W4ZW87	A0A0W4ZRS4	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.547
T551_00133	T551_01628	A0A0W4ZW87	A0A0W4ZRS8	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.547
T551_00133	T551_01639	A0A0W4ZW87	A0A0W4ZRV0	Uncharacterized protein.	Uncharacterized protein.	0.955
T551_00133	T551_01679	A0A0W4ZW87	A0A0W4ZPV7	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.898
T551_00133	T551_01745	A0A0W4ZW87	A0A0W4ZQ30	Uncharacterized protein.	Uncharacterized protein.	0.980
T551_00133	T551_01770	A0A0W4ZW87	A0A0W4ZQ32	Uncharacterized protein.	CDK-activating kinase assembly factor MAT1.	0.993
T551_00133	T551_01948	A0A0W4ZW87	A0A0W4ZNQ5	Uncharacterized protein.	SAP30_Sin3_bdg domain-containing protein.	0.849
T551_00133	T551_01988	A0A0W4ZW87	A0A0W4ZNU4	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
T551_00133	T551_02008	A0A0W4ZW87	A0A0W4ZNX2	Uncharacterized protein.	Ubiquitin-60S ribosomal protein L40.	0.619
T551_00133	T551_02073	A0A0W4ZW87	A0A0W4ZM71	Uncharacterized protein.	Uncharacterized protein.	0.628
T551_00133	T551_02081	A0A0W4ZW87	A0A0W4ZM54	Uncharacterized protein.	Uncharacterized protein.	0.997
T551_00133	T551_02761	A0A0W4ZW87	A0A0W4ZJ02	Uncharacterized protein.	Uncharacterized protein.	0.999
T551_00133	T551_02953	A0A0W4ZW87	A0A0W4ZGE3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.974
T551_00133	T551_03015	A0A0W4ZW87	A0A0W4ZGK9	Uncharacterized protein.	Uncharacterized protein.	0.999