STRINGSTRING
T551_02840 T551_02840 NTH1 NTH1 UNG1 UNG1 T551_03382 T551_03382 T551_03135 T551_03135 T551_03155 T551_03155 T551_02820 T551_02820 T551_02853 T551_02853 T551_02613 T551_02613 T551_02283 T551_02283 FEN1 FEN1 T551_02170 T551_02170 T551_01874 T551_01874 T551_01969 T551_01969 T551_02047 T551_02047 T551_02044 T551_02044 T551_01791 T551_01791 T551_01850 T551_01850 T551_01610 T551_01610 T551_01628 T551_01628 T551_01210 T551_01210 T551_01233 T551_01233 T551_01314 T551_01314 T551_01376 T551_01376 T551_01111 T551_01111 T551_00786 T551_00786 T551_00843 T551_00843 T551_05052 T551_05052 T551_00508 T551_00508 T551_00543 T551_00543 T551_00144 T551_00144
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T551_02840ENDO3c domain-containing protein. (337 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (303 aa)
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (372 aa)
T551_03382AAA domain-containing protein. (361 aa)
T551_03135Uncharacterized protein. (146 aa)
T551_03155CBFD_NFYB_HMF domain-containing protein. (152 aa)
T551_02820Uncharacterized protein. (351 aa)
T551_02853Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (250 aa)
T551_02613Uncharacterized protein. (103 aa)
T551_02283Replication factor C subunit 4. (351 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (354 aa)
T551_02170Uncharacterized protein. (265 aa)
T551_01874Uncharacterized protein. (200 aa)
T551_01969DNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (708 aa)
T551_02047Telo_bind domain-containing protein. (521 aa)
T551_02044DNA polymerase. (1088 aa)
T551_01791Zds_C domain-containing protein. (750 aa)
T551_01850Replication factor C subunit 3. (356 aa)
T551_01610Histone H2B; Belongs to the histone H2B family. (134 aa)
T551_01628Histone H2B; Belongs to the histone H2B family. (226 aa)
T551_01210Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (598 aa)
T551_01233DNA_pol_E_B domain-containing protein. (634 aa)
T551_01314DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2179 aa)
T551_01376DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (556 aa)
T551_01111CMP/dCMP-type deaminase domain-containing protein. (194 aa)
T551_00786Uncharacterized protein. (469 aa)
T551_00843Uncharacterized protein. (467 aa)
T551_05052RPA_C domain-containing protein. (294 aa)
T551_00508Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (471 aa)
T551_00543Replication factor C subunit 1. (960 aa)
T551_00144UDG domain-containing protein. (297 aa)
Your Current Organism:
Pneumocystis jirovecii RU7
NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7
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