15 items (Pneumocystis jirovecii RU7) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T551_00213	Uncharacterized protein. (1024 aa)
	T551_03328	Uncharacterized protein. (696 aa)
	T551_02650	RING-type domain-containing protein. (129 aa)
	T551_02456	Protein YIP. (166 aa)
	T551_02573	Plus3 domain-containing protein. (552 aa)
	T551_02304	UBIQUITIN_CONJUGAT_2 domain-containing protein. (165 aa)
	T551_02124	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (229 aa)
	T551_01944	Uncharacterized protein. (1381 aa)
	T551_01748	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)
	T551_01610	Histone H2B; Belongs to the histone H2B family. (134 aa)
	T551_01628	Histone H2B; Belongs to the histone H2B family. (226 aa)
	T551_00929	Ubiquitin-40S ribosomal protein S27a. (153 aa)
	T551_01178	Uncharacterized protein. (762 aa)
	T551_00847	Polyubiquitin. (181 aa)
	T551_00873	Uncharacterized protein. (985 aa)

Your Current Organism:

Pneumocystis jirovecii RU7

NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T551_00213	T551_00847	A0A0W4ZWI0	A0A0W4ZUV9	Uncharacterized protein.	Polyubiquitin.	0.696
T551_00213	T551_00873	A0A0W4ZWI0	A0A0W4ZUZ8	Uncharacterized protein.	Uncharacterized protein.	0.404
T551_00213	T551_00929	A0A0W4ZWI0	A0A0W4ZTK0	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.699
T551_00213	T551_01610	A0A0W4ZWI0	A0A0W4ZRS4	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.626
T551_00213	T551_01628	A0A0W4ZWI0	A0A0W4ZRS8	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.626
T551_00213	T551_01748	A0A0W4ZWI0	A0A0W4ZQ36	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.551
T551_00213	T551_01944	A0A0W4ZWI0	A0A0W4ZNQ0	Uncharacterized protein.	Uncharacterized protein.	0.457
T551_00213	T551_02124	A0A0W4ZWI0	A0A0W4ZMA6	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.539
T551_00213	T551_02573	A0A0W4ZWI0	A0A0W4ZK12	Uncharacterized protein.	Plus3 domain-containing protein.	0.400
T551_00847	T551_00213	A0A0W4ZUV9	A0A0W4ZWI0	Polyubiquitin.	Uncharacterized protein.	0.696
T551_00847	T551_00873	A0A0W4ZUV9	A0A0W4ZUZ8	Polyubiquitin.	Uncharacterized protein.	0.696
T551_00847	T551_00929	A0A0W4ZUV9	A0A0W4ZTK0	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.991
T551_00847	T551_01178	A0A0W4ZUV9	A0A0W4ZU58	Polyubiquitin.	Uncharacterized protein.	0.696
T551_00847	T551_01610	A0A0W4ZUV9	A0A0W4ZRS4	Polyubiquitin.	Histone H2B; Belongs to the histone H2B family.	0.835
T551_00847	T551_01628	A0A0W4ZUV9	A0A0W4ZRS8	Polyubiquitin.	Histone H2B; Belongs to the histone H2B family.	0.835
T551_00847	T551_01748	A0A0W4ZUV9	A0A0W4ZQ36	Polyubiquitin.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.997
T551_00847	T551_01944	A0A0W4ZUV9	A0A0W4ZNQ0	Polyubiquitin.	Uncharacterized protein.	0.727
T551_00847	T551_02124	A0A0W4ZUV9	A0A0W4ZMA6	Polyubiquitin.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.927
T551_00847	T551_02304	A0A0W4ZUV9	A0A0W4ZL83	Polyubiquitin.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.727
T551_00847	T551_02650	A0A0W4ZUV9	A0A0W4ZIN9	Polyubiquitin.	RING-type domain-containing protein.	0.615